Phragmites australis (common reed): 133911508
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Entry
133911508 CDS
T10575
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like isoform X1
KO
K04523
ubiquilin
Organism
paua Phragmites australis (common reed)
Pathway
paua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133911508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133911508
03051 Proteasome [BR:
paua03051
]
133911508
Membrane trafficking [BR:
paua04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
133911508
Proteasome [BR:
paua03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
133911508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Rad60-SLD_2
Dsc3_N
GerD
TBK1_ULD
Ubiquitin_5
HEAT_HEATR1
TSC22
Motif
Other DBs
NCBI-GeneID:
133911508
NCBI-ProteinID:
XP_062209754
LinkDB
All DBs
Position
3:complement(2132256..2136955)
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AA seq
533 aa
AA seq
DB search
MGGGDANTGGEPAAAPPATLHIRCTNGSKFAVRADLDATVGAFKAIVAENCDVPPQQQRL
IYKGRILKDEQTLASCGVETDHTIHMVRGAVPPPASTAPAANQKTSATTTASSPAAGLGG
LMQGLGATGAGNSGGLGLFGSGLPELDQMQQQLAENPNLMREIMNMPLMQNIMNSPDLIR
NIIMNNPQMRELIDRNPDLAHVLNDPSILRQTVEAARNPELMREMMRNTDRAMSNIESSP
EGFNMLRRMYETVQEPFLNATTMGGEGDRNPNPFAALLGNQGSNQARDTAANAPTTASDS
ITGSPAPNANPLPNPWSPTAGSAQGAASPSPASNTRSATTGGLGGLGSADLGSMLGGGSN
ASFLSQVLQDPTMMRMMQNIMSNPQSMNQLLNINPNVRNMMESNTQLREMFQNPEFLRQL
TSPETLQQLISFQQSLMSQLGQQQAGQERTQPGTGAGNVNLNTLMSMFSGLGAGGGLGVP
NTPNVPPEELYATQLAQLQEMGFFDTQENLRALIATAGNVHAAVERLLGNLGQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggggggaggggacgccaacaccggtggcgagcccgcggctgcgccaccggcgacgctg
cacatccggtgcaccaacgggtccaagttcgccgtgcgggccgacctggacgccaccgtc
ggggcgttcaaggcgatcgtcgccgagaactgcgacgtgccgccgcagcagcagcggttg
atctacaagggccggatcttgaaggacgagcaaaccctagccagctgcggtgtggagaca
gatcataccattcacatggtgcgtggtgctgtgccaccaccagcatcgactgcacctgca
gccaaccaaaaaacctcagctactactactgccagttccccagcagctggtttgggaggc
ttgatgcaaggtctgggtgctacaggggctggtaatagtggagggttgggtttatttggc
tctggcctcccagaactagaccagatgcaacaacagttagccgagaatcccaacttgatg
agagaaataatgaatatgccactcatgcagaatataatgaatagtcctgatctaatacgc
aatataataatgaacaatcctcaaatgcgtgaactcattgatcgtaacccggatcttgcc
catgtcctcaatgatccaagtatcctccgccagactgttgaagcagctaggaatcctgaa
cttatgagggagatgatgcggaacacagacagagctatgagcaacattgaatcttctcca
gaagggttcaacatgctccgtcgtatgtatgaaactgttcaagagccttttctgaatgca
acaacaatgggtggcgagggtgatagaaatccgaacccatttgcagctcttctcggaaat
caggggtctaaccaagcaagagatacagccgcaaatgcaccaactacagcttcagattcc
ataacagggtcgccagctccgaatgctaacccacttccaaatccctggagcccgactgct
ggatctgcccaaggagcagcaagtccctctcctgcaagcaacacaaggagtgctacaact
ggtggcctaggagggttgggttctgcagatttgggaagtatgcttggtggtggctctaat
gcttccttcttgagtcaggttttgcaagacccaactatgatgcggatgatgcagaacatt
atgtctaatcctcagtccatgaatcagttgcttaatataaacccaaatgtacgtaatatg
atggaatcgaatacacaactgagagaaatgtttcagaatccggaatttcttcgccagttg
acatctcccgaaacattgcagcaattaatttcattccagcagtctttgatgtcacagctt
ggtcaacaacaagctggacaggagcgtacgcaaccaggcactggtgcaggcaatgtcaac
ctcaacaccttgatgagcatgttcagcgggcttggagctggtggcggcctgggcgttcca
aacacccctaatgtgccgccggaagaactctatgcaacacagctagcccagctccaagaa
atgggtttctttgacacacaggagaacctccgagctctgatcgctaccgctggaaatgtt
catgctgcagtggagcgtcttcttggtaatttgggccaatag
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