KEGG   Phragmites australis (common reed): 133911567
Entry
133911567         CDS       T10575                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
paua  Phragmites australis (common reed)
Pathway
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133911567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133911567
   03009 Ribosome biogenesis [BR:paua03009]
    133911567
   04131 Membrane trafficking [BR:paua04131]
    133911567
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133911567
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     133911567
Ribosome biogenesis [BR:paua03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    133911567
Membrane trafficking [BR:paua04131]
 SNARE
  SNARE associated proteins
   Others
    133911567
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    133911567
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133911567
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 AAA_33 AAA_5 CDC48_2 AAA_22 AAA_14 TIP49 NPHP3_N RNA_helicase AAA_17 nSTAND3 AAA_28 Mg_chelatase Parvo_NS1 AAA_18 ATPase_2 IstB_IS21 ABC_tran AAA_7 Vps4_C Viral_helicase1 NB-ARC TsaE NACHT AAA_24 AAA_lid_PRS2_C Zeta_toxin DUF815 ResIII Cytidylate_kin2
Other DBs
NCBI-GeneID: 133911567
NCBI-ProteinID: XP_062209846
LinkDB
Position
3:2914435..2917179
AA seq 792 aa
MADDRAASSAPAVTKKKAANRLVVEEATTDDNSICMLNPATMDKLSIFHGDVVLLKGKRR
RDTVCIAMSDEHCEESKIKINKAVRSNLRVRLADVVSVHVCHDAKYGARVHILPVDDTVE
GLTGDLLEAYLKPYFLHAYRPVRKGDLFLVRGGMRSVEFKVMDIEPAAEYCIVALDTEIF
CDGEPVKREDEERLDDVGYDDVGGMRKQLGQIRELVELPLRHPQLFRSIGVKPPKGILLY
GPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFVD
EIDSIAPKREKTHGEVEKRIVSQLLTLMDGLKARAHVIVMGATNRPNSIDPALRRFGRFD
REIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLEVVAKDTHGYVGADLAALCTEAALQCIR
EKMDVIDLEDETIDAEILNSMAITNDHLKIALAGTNPSALRETVVEVPNVSWADIGGLEG
VKRELQETVQYPVEHPDKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKG
PELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGSVGDAGGAGDRVLNQL
LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRHQIFKACLRKS
PVASNVDLGALAKFTAGFSGADITEICQRACKYAIREDIEKDIERQRKSKENSEDTEVDC
TEEPAQIKVPHFEESMKYARRSVSDADIRRYQAFAQTLQQSRGFGSEFRFSTHSKPAEPA
VTANADEDDLYN
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggccgacgacagagccgcttcctctgctcccgccgtcaccaagaagaaggccgcgaac
cggctggtggtggaggaggcgaccacagacgacaactccatctgtatgctcaacccggcc
accatggacaagctctccatcttccacggcgacgtcgtcctgctcaaaggaaagcgccgc
cgcgacacggtctgcatagccatgtcggacgagcactgcgaggagagcaagatcaagatc
aacaaggcggtccgctcgaacctccgcgtgcgcctcgccgacgtcgtgtccgtgcacgtg
tgccacgacgccaagtacggggcgcgcgtccacatcctccccgtcgacgacaccgtcgag
ggcctcacgggggacctcttggaggcgtacctgaagccttacttcctccacgcataccgc
ccggtccgcaagggcgacctcttcctcgtgcgcggcggcatgcggagcgtcgagttcaag
gtcatggacatcgagcctgcggctgagtactgcatcgtcgcgctcgacacggagatcttc
tgcgacggcgagccagtgaagcgtgaggacgaggagaggctggacgacgtcggctacgat
gacgtcggaggcatgcgcaagcagttgggccagatcagggagctcgtcgagctgcctctc
aggcacccgcagttgttcaggtccattggggtcaagcctccaaaaggcatccttttgtac
ggccctcccggctccggcaagactcttatcgctcgtgctgtggccaacgagacaggtgca
ttcttcttctgcatcaacgggccggaaatcatgtcgaagatggccggagagagcgagagc
aatttgaggaaggcgttcgaggaggccgagaagaacgcgccatccatcatcttcgttgac
gagatcgactcgatcgccccaaagagggagaagacccacggggaggttgagaagcgtatt
gtctcccagctgctcacgctgatggacgggctgaaggcacgcgcgcatgttatcgtcatg
ggcgcgacgaaccgcccgaacagcatcgaccctgctttgagacggttcggcaggttcgat
cgcgagatcgacattggcgtgccggacgaggttggtcgccttgaggtgttgcgtattcat
acaaagaacatgaagctcgctgaggatgtgaacctggaggttgtggccaaggacacgcat
gggtatgttggtgctgacctcgccgccctctgcactgaggctgctctgcaatgcataagg
gagaagatggacgtgattgacctagaggacgagacaatcgatgcagaaattcttaactcg
atggccatcacaaatgaccatctcaagattgctcttgctggcaccaatccatctgcgcta
cgtgaaacggtggtcgaggtgcccaatgtcagctgggcggacatcggaggcctcgagggc
gtcaagagggaactgcaagaaacagttcagtacccggtggagcatccggacaagttcgaa
aagtttggcatgtccccttccaagggcgtgctgttctacggaccaccgggttgcggcaag
actcttctcgcaaaggcgatcgcgaatgaatgtcaagcaaactttatcagcgtcaaaggc
cctgagctgctgaccatgtggttcggcgagagcgaggccaacgtccgtgagatctttgac
aaggcgcgtcagtctgctccgtgcgtcctattcttcgatgagctcgattcaatcgcgacg
cagaggggcggcagcgtgggagacgctggaggtgctggggacagggtcctcaaccagctg
ctcaccgagatggacggcatgaatgcaaagaagacggtgttcatcatcggcgccaccaac
cggccggacatcatcgatcccgcgctgctccgtcctggccgtctcgaccagcttatctac
atccccttgcccgacgaggcttcgcgccaccagatctttaaggcgtgcctgaggaagtcc
cccgttgcgagcaacgtcgaccttggcgcgctcgccaagttcacggcgggcttcagcggt
gcggacattaccgagatttgccagagggcgtgcaagtatgccatccgtgaagacattgag
aaagacatcgagcggcaaaggaagtccaaggagaactcggaagacacagaggtggactgc
accgaggagccggcacagatcaaggtgcctcactttgaggagtccatgaagtacgcgcgg
aggagcgtcagcgacgcggacatccggaggtatcaggcgttcgcgcagacgctgcagcaa
tcgaggggtttcggcagcgagttccgcttctcgacgcattccaaaccggctgaacctgct
gtgacggccaacgccgacgaggatgatctttacaactga

DBGET integrated database retrieval system