Phragmites australis (common reed): 133911573
Help
Entry
133911573 CDS
T10575
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133911573
Factors involved in mRNA localization
Other mRNA localization factors
133911573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133911573
NCBI-ProteinID:
XP_062209851
LinkDB
All DBs
Position
3:2972313..2998898
Genome browser
AA seq
1290 aa
AA seq
DB search
MAIPVEEAIAALSTFSLEDEQPDVQGLAVLLSSERYATNSPIEYSDVAAYRLSLGEDTKA
INQLNTLIQEGKEMASLLYTYRSCVKALPQLPDSMKHNQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLVNGPTITHFWSMLKLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQVSTQWQDTDTMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSSEKESESLYKRVKINRLLNIFKNDPVI
PAFPDLHLSPAAMLKELSSYFQNFSSQTRLLTLPAPHEIPPRELQDYQRHYLILNHMGTI
RAEHDDFSIRFASAMNQMIILKSSDGADNDWSRDIKGNMYDIVVEGFQLLSRWTGRIWEQ
CAWKFSRPCKEPPISDSQQNSTTCFDYEKVVRWNYTAEERRALLELIGYIKSIGLMMQHC
DTLVSEALWETIHMEVQDFVQDKLDTMLRTTFRKKKDLSRILSDMRTLSADWMANTSKAD
PEQHSLHQETEEMRQNTFYPRPVAPTAAQIHCLQFLICELVSGGNLRKPGGLFGNSGSGI
PVEDLKQLETFFYKLSFFLHILDYTATIGALTDLGFLWFREFYLESSRVIQFPIECSLPW
MLADHVIESQDAGLLESILIPFDLYNDSAQHALTCLKQRFLYDEIEAEVDLCFDLLAQKL
NEIIFTYYKSCAASTLLDSSFTYACDDGDKYFVKPLRFDAIFKLRRVMVLGRTIDLRSLI
TQRMNKMFRENIDFLLERFENGDLCGVVELQQLLDILELTHQSISRFLELDSYSLMFSEM
QENLSLVSYSSRISSQIWSEMQTDFLPNFILCNTTQRFVRSIKGTHHSSQRLSASTGKPY
FYCGSHDLTMAYQGLAGLYRDFFGVPHMFAVVKLLGSRSLPAIIRALLDHISSKVTGMVP
KITALQEALPKSIGLLSFDGGIAGCQKIIHEILTWEAKSEVKTEVLHDLKEIGSALYWMS
ILDIVLRQIDTTQFMQSAPWLGLVPGNDGQVKHAYSDNTPFTTLLSAATNAIASSPACPN
PSTFLVMSKQAETASLLYKSNLNSGSVLEYALAFTSAALDRQYSKWSATPKTGFIDITTS
KDFYRIFSGLQYSYLEDSFNNPLKKQEMLGDSVAWAGCTIMYLLGQQQHFELFDFSYQFL
NVAEVESATVSHYQSSDRTKSPNILQGYEGILEAMRKARRLNNHVFSMLRARCPLEDKIA
CAIKPSGAPLHRMKFMNTVSAFETLPQRVT
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggccatccccgtcgaggaagccatcgccgccctctccaccttctcccttgaggatgag
caaccggatgtgcagggattagctgtgctcctgtcaagtgaaagatatgcaactaacagt
cctattgagtacagcgatgttgctgcttatcgtctatcattaggagaagatacaaaagca
atcaaccagctgaatacgctgattcaagaaggaaaagaaatggcatctttgttgtacaca
taccgtagctgtgtaaaagcactacctcagctgcctgattcaatgaagcataaccaagca
gacttgtatctggaaacctatcaagttcttgacttggaaatgagtcgtttacgtgaaatt
cagagatggcaagcatctgctgcttcgaagctggcagctgacatgcagagattttctagg
ccagagagactggttaatggacccacaatcactcatttttggtctatgctgaagttgctt
gatgtcctactgcagcttgatcatcttaagaatgcaaaagcgagtatacctaatgatttt
tcatggtacaaaagaacatttactcaagtaagcacccagtggcaggatactgacaccatg
agagaagagctggatgatcttcagatttttctgagcaccagatgggccatcttattaaat
ttgcacgctgagatgtttcggacaaatactgttgaggatattctacaggtccttatagta
ttttgtgtggagtcattggagttggactttgctcttctttttcctgagcgtcatacccta
cttcgtgttctccctgttttggttgttttagcaacctcatcagagaaggagagcgagtcg
ctttataagagggtgaagataaatcgtcttctcaacatttttaagaatgacccagttatt
ccggcatttcccgatctgcatctctctcctgctgcaatgttgaaggaattgtcatcatat
tttcaaaatttttccagtcaaactcgtctccttactcttccggctcctcatgaaattcct
cctcgagagctacaagattatcagaggcattacttgattttgaatcacatgggaactatc
agagctgagcatgatgacttctctatacgttttgcctctgctatgaatcagatgataata
ttgaagtcatcagatggtgcagataatgactggtctagagatattaaagggaacatgtat
gatattgtcgtggaaggcttccagcttcttagtcgttggactggcaggatatgggaacaa
tgtgcttggaaattctctcgcccctgtaaagaacctcctatttcagattctcaacaaaac
tccacgacatgttttgactatgaaaaggtagtacgctggaactatactgcagaagaacga
agggctctgcttgaattaattggttacataaagagcattggattgatgatgcaacattgt
gataccttagtatctgaagctttatgggaaacaatacatatggaggtccaagattttgta
caggataaactagatacaatgcttcgtacaacatttagaaagaagaaggacctttctcgg
attctctctgatatgcgaaccctctcggcagattggatggccaacactagcaaggcagac
ccggagcagcactcgctacaccaagaaacagaggaaatgagacaaaacacattttaccca
agaccagttgcaccaacagctgcacagattcattgtttgcaatttcttatctgtgagctt
gtatctggtggtaatctgagaaaacctggaggattatttgggaatagcggctctggcata
cctgtggaagatcttaaacaattagagacatttttctacaagctcagtttcttcttgcat
attctggattacacagcgactattggtgcgctaactgatcttgggtttctttggttcaga
gaattttacctggaatcttcccgtgtaattcagtttccaattgaatgctcgctcccgtgg
atgctggcggaccatgtcattgaatcacaagatgctggtcttcttgaaagcattttgata
ccgtttgacctttacaatgactctgctcaacatgccctaacttgtctcaagcagagattt
ctttatgatgaaattgaagctgaggttgatctatgtttcgatcttcttgctcagaagctt
aatgagatcatctttacgtattacaagagctgtgcagcaagtactcttcttgatagttca
tttacatatgcatgtgatgatggtgacaagtactttgtcaaacctttgcgatttgatgca
attttcaagttaagaagagtaatggttttagggaggaccattgacctaagaagcctaatt
actcagagaatgaacaaaatgttccgggaaaatattgattttctacttgaacgctttgaa
aatggagacctatgtggtgttgtggaactgcaacaactgttggatattttggagcttaca
caccaatcgatatcaagatttcttgaattggattcttactctcttatgtttagcgagatg
caagagaatctttcgctggtttcttattcaagtcgcatctcttctcagatatggagtgag
atgcagacagatttcttgcccaatttcatcctatgtaataccacacaacggtttgttcga
tccattaaaggaactcatcactcttctcagagattaagtgcttctactgggaagccctac
ttctattgcggatcacatgatttgaccatggcataccagggtcttgctgggttgtaccgt
gacttttttggagtccctcatatgttcgcagtagttaaacttcttggttccagatcatta
cctgcaatcatccgtgctttactggatcatatatcaagtaaggtaacaggtatggtgcca
aaaataactgcactgcaagaagcattgccaaaatctattggacttctttcatttgatggt
ggtatagcaggttgccagaagataattcatgaaattttaacatgggaagcaaaatcggag
gtgaaaactgaagttcttcatgaccttaaggaaattggaagtgctttgtattggatgagc
attttggacattgttttgagacaaatcgacactacacagttcatgcagtcagctccatgg
ctgggactggttccaggaaatgatgggcaagtgaagcatgcctactctgataatactcca
tttaccacacttctaagtgctgccaccaatgccatcgcatcaagccctgcatgcccaaat
ccatctacgtttcttgtcatgtcaaagcaagctgaaactgccagtctactgtacaaatca
aatctcaactctgggagtgtgctggagtatgcacttgctttcacaagtgctgccctggat
agacagtacagcaaatggagcgcaactccaaagacaggttttatcgacattaccacttca
aaggacttctaccgcatttttagcggtcttcagtatagttatttagaagatagctttaac
aatcctttaaagaaacaggaaatgttgggtgattctgtagcatgggctggttgtacgatc
atgtacttactgggacagcagcagcacttcgagctttttgatttctcctatcaatttctc
aatgtggcagaagtagaaagtgcaacggtttcacattatcaatcttcagataggaccaaa
agtccaaatatcttacaaggttatgagggcattcttgaagcgatgaggaaggctaggagg
ctgaataaccacgttttctccatgttgagggcgcgttgccccctcgaggacaagattgcg
tgtgccatcaagccaagcggggcacctcttcaccgtatgaagtttatgaacactgtttct
gctttcgagacattgccacaaagagtcacctga
DBGET
integrated database retrieval system
