Phragmites australis (common reed): 133911612
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Entry
133911612 CDS
T10575
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
paua Phragmites australis (common reed)
Pathway
paua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133911612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133911612
03009 Ribosome biogenesis [BR:
paua03009
]
133911612
04131 Membrane trafficking [BR:
paua04131
]
133911612
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133911612
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133911612
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133911612
Membrane trafficking [BR:
paua04131
]
SNARE
SNARE associated proteins
Others
133911612
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133911612
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133911612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_5
AAA_2
CDC48_2
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_17
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_lid_PRS2_C
NACHT
AAA_7
NB-ARC
Viral_helicase1
Vps4_C
TsaE
ResIII
AAA_24
DUF815
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Rad17
Zot
Motif
Other DBs
NCBI-GeneID:
133911612
NCBI-ProteinID:
XP_062209918
LinkDB
All DBs
Position
3:complement(3465741..3470536)
Genome browser
AA seq
809 aa
AA seq
DB search
MASQGEPSSSDPKGKKDYSTAILERKKLPNRLVADEATNDDNSVVTLHPDTMERLQLFRG
DTVLLKGKKRKDTICIVLADDTCEVPKVRMNKVVRKNLRLRLGDVVSVHQCPDVKYGKRV
HILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYC
IVAPDTEIFCEGEPFKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALC
TEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVA
WHDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQ
IFKACLRKSPVAKDVDLSALAKYTQGFSGADITEVCQRACKYAIRENIEKDIERERRRED
NPEAMEEDEVDDIAEIKGAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFP
DQPAAAGTGAAADPFASAAAAADDDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccagggcgagccctcgtcctccgatccgaaggggaagaaggattactcgacg
gcgatcctggagaggaagaagttgccgaaccggctggtggccgacgaggccaccaatgac
gacaactccgtcgttacgctccacccggacaccatggagaggctccagctcttccgcggc
gacactgtcctgctcaagggtaagaagagaaaagacacgatctgcattgtgcttgcagat
gacacgtgtgaggttccaaaggtccggatgaacaaggtcgtcaggaagaacttgaggttg
cgacttggtgatgtggtttctgtccatcaatgcccagatgtcaaatacgggaagcgcgtg
cacatacttccaattgatgacacagttgaaggcattactggcaacttgtttgatgccttc
ttgaaaccatacttccttgaagcctatcgccctttgagaaaaggagaccttttccttgtc
aggggtggtatgagaagtgtagaattcaaagttatagagactgaccctgcagagtattgc
attgttgcaccagatacagaaatattctgtgagggtgagccttttaagagggaggatgag
gaaaggctcgatgaagttggctatgacgatgttggaggggttagaaagcagatggcccaa
atcagagaattggttgaacttccactgcgtcatccccagcttttcaagtccattggtgtg
aagccaccaaagggcatactgctgtatgggccacctggctctggcaagacccttattgct
agagctgtagctaatgaaaccggtgcattcttctttctgatcaatggaccagaaattatg
tcaaagctagcaggagaaagtgagagcaatctcagaaaggcatttgaagaagctgagaag
aatgcaccatccatcattttcattgatgagttagattccatagcacctaagagagagaag
acccatggagaagttgaaaggcgtattgtttcacagctcttgactcttatggatggcctc
aagtctcgtgcacatgttattgttatgggtgctaccaaccgtccaaacagcattgatcct
gctcttagaagatttggtaggtttgaccgtgagattgacattggagttcctgatgaagtt
gggcgccttgaggttctccggattcacactaaaaacatgaagctggctgaagatgttgac
ttggagcacattgcgaaggatacccatggttacgtcggtgctgatcttgctgccctttgt
actgaggctgctctccagtgcattcgtgagaagatggatattatagatcttgaggatgag
acaatagatgctgagatactgaattctatggctgtcacaaatgaccatttcaagactgca
cttgggacaagcaacccgtctgctctccgtgaaactgtcgttgaagttccaaacgtcgct
tggcatgatattggtggtttggagaacgtcaagagggagctccaggagactgtccaatat
ccagtggagcatcctgagaagtttgaaaagtttggcatgtctccttcaaagggtgttctg
ttttatggtcctcctggttgtggcaagactctgttggccaaggcaattgctaatgaatgc
caggctaacttcattagtgtgaagggaccagagctacttaccatgtggtttggtgagagc
gaggcaaatgtgcgcgagatttttgacaaggctaggcagtctgctccatgcgtcctcttc
tttgatgaacttgactccattgctactcagagaggaaacagtgttggtgatgccggaggt
gcggctgatagggtgttgaaccagttgctgactgagatggatggcatgaatgccaagaag
actgttttcatcatcggtgccactaacaggccagacataattgaccccgccttgcttagg
ccagggcgtcttgatcagctgatctacattcctctgcctgacgagcaatccaggctccag
atcttcaaagcctgtctcaggaagtctcctgttgctaaggatgttgacttgagtgctctt
gccaaatacacccaggggttcagcggtgcagatatcacagaagtctgtcagcgagcgtgc
aagtatgccatcagggagaacatcgaaaaagacatcgaaagggagaggcgtagggaggac
aaccctgaggccatggaggaagatgaggtggacgacattgctgagatcaagggtgctcac
ttcgaggagtccatgaagtacgcccgaaggagtgtgagtgacgccgacatccgcaagtac
caggccttcgcgcagacgctgcagcagtctcgcgggattggcagcgagttcaggttcccc
gaccagccggcagcggcgggcactggcgctgcggccgaccccttcgcatccgcagcggca
gcagctgacgatgatgacttgtatagttaa
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