KEGG   Phragmites australis (common reed): 133911612
Entry
133911612         CDS       T10575                                 
Name
(RefSeq) cell division control protein 48 homolog E-like
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
paua  Phragmites australis (common reed)
Pathway
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133911612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133911612
   03009 Ribosome biogenesis [BR:paua03009]
    133911612
   04131 Membrane trafficking [BR:paua04131]
    133911612
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133911612
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     133911612
Ribosome biogenesis [BR:paua03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    133911612
Membrane trafficking [BR:paua04131]
 SNARE
  SNARE associated proteins
   Others
    133911612
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    133911612
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133911612
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_33 AAA_5 AAA_2 CDC48_2 AAA_22 AAA_14 NPHP3_N TIP49 RNA_helicase nSTAND3 Mg_chelatase AAA_28 ATPase_2 AAA_17 AAA_18 Parvo_NS1 IstB_IS21 ABC_tran AAA_lid_PRS2_C NACHT AAA_7 NB-ARC Viral_helicase1 Vps4_C TsaE ResIII AAA_24 DUF815 Zeta_toxin SLFN-g3_helicase KAP_NTPase Rad17 Zot
Other DBs
NCBI-GeneID: 133911612
NCBI-ProteinID: XP_062209918
LinkDB
Position
3:complement(3465741..3470536)
AA seq 809 aa
MASQGEPSSSDPKGKKDYSTAILERKKLPNRLVADEATNDDNSVVTLHPDTMERLQLFRG
DTVLLKGKKRKDTICIVLADDTCEVPKVRMNKVVRKNLRLRLGDVVSVHQCPDVKYGKRV
HILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYC
IVAPDTEIFCEGEPFKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALC
TEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVA
WHDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQ
IFKACLRKSPVAKDVDLSALAKYTQGFSGADITEVCQRACKYAIRENIEKDIERERRRED
NPEAMEEDEVDDIAEIKGAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFP
DQPAAAGTGAAADPFASAAAAADDDDLYS
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggcgagccagggcgagccctcgtcctccgatccgaaggggaagaaggattactcgacg
gcgatcctggagaggaagaagttgccgaaccggctggtggccgacgaggccaccaatgac
gacaactccgtcgttacgctccacccggacaccatggagaggctccagctcttccgcggc
gacactgtcctgctcaagggtaagaagagaaaagacacgatctgcattgtgcttgcagat
gacacgtgtgaggttccaaaggtccggatgaacaaggtcgtcaggaagaacttgaggttg
cgacttggtgatgtggtttctgtccatcaatgcccagatgtcaaatacgggaagcgcgtg
cacatacttccaattgatgacacagttgaaggcattactggcaacttgtttgatgccttc
ttgaaaccatacttccttgaagcctatcgccctttgagaaaaggagaccttttccttgtc
aggggtggtatgagaagtgtagaattcaaagttatagagactgaccctgcagagtattgc
attgttgcaccagatacagaaatattctgtgagggtgagccttttaagagggaggatgag
gaaaggctcgatgaagttggctatgacgatgttggaggggttagaaagcagatggcccaa
atcagagaattggttgaacttccactgcgtcatccccagcttttcaagtccattggtgtg
aagccaccaaagggcatactgctgtatgggccacctggctctggcaagacccttattgct
agagctgtagctaatgaaaccggtgcattcttctttctgatcaatggaccagaaattatg
tcaaagctagcaggagaaagtgagagcaatctcagaaaggcatttgaagaagctgagaag
aatgcaccatccatcattttcattgatgagttagattccatagcacctaagagagagaag
acccatggagaagttgaaaggcgtattgtttcacagctcttgactcttatggatggcctc
aagtctcgtgcacatgttattgttatgggtgctaccaaccgtccaaacagcattgatcct
gctcttagaagatttggtaggtttgaccgtgagattgacattggagttcctgatgaagtt
gggcgccttgaggttctccggattcacactaaaaacatgaagctggctgaagatgttgac
ttggagcacattgcgaaggatacccatggttacgtcggtgctgatcttgctgccctttgt
actgaggctgctctccagtgcattcgtgagaagatggatattatagatcttgaggatgag
acaatagatgctgagatactgaattctatggctgtcacaaatgaccatttcaagactgca
cttgggacaagcaacccgtctgctctccgtgaaactgtcgttgaagttccaaacgtcgct
tggcatgatattggtggtttggagaacgtcaagagggagctccaggagactgtccaatat
ccagtggagcatcctgagaagtttgaaaagtttggcatgtctccttcaaagggtgttctg
ttttatggtcctcctggttgtggcaagactctgttggccaaggcaattgctaatgaatgc
caggctaacttcattagtgtgaagggaccagagctacttaccatgtggtttggtgagagc
gaggcaaatgtgcgcgagatttttgacaaggctaggcagtctgctccatgcgtcctcttc
tttgatgaacttgactccattgctactcagagaggaaacagtgttggtgatgccggaggt
gcggctgatagggtgttgaaccagttgctgactgagatggatggcatgaatgccaagaag
actgttttcatcatcggtgccactaacaggccagacataattgaccccgccttgcttagg
ccagggcgtcttgatcagctgatctacattcctctgcctgacgagcaatccaggctccag
atcttcaaagcctgtctcaggaagtctcctgttgctaaggatgttgacttgagtgctctt
gccaaatacacccaggggttcagcggtgcagatatcacagaagtctgtcagcgagcgtgc
aagtatgccatcagggagaacatcgaaaaagacatcgaaagggagaggcgtagggaggac
aaccctgaggccatggaggaagatgaggtggacgacattgctgagatcaagggtgctcac
ttcgaggagtccatgaagtacgcccgaaggagtgtgagtgacgccgacatccgcaagtac
caggccttcgcgcagacgctgcagcagtctcgcgggattggcagcgagttcaggttcccc
gaccagccggcagcggcgggcactggcgctgcggccgaccccttcgcatccgcagcggca
gcagctgacgatgatgacttgtatagttaa

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