Phragmites australis (common reed): 133911615
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Entry
133911615 CDS
T10575
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133911615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133911615
03036 Chromosome and associated proteins [BR:
paua03036
]
133911615
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
133911615
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
133911615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
133911615
NCBI-ProteinID:
XP_062209920
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Position
3:3490026..3494803
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AA seq
373 aa
AA seq
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MVSGVAHRPDEDGAAQRPPPPAGAGARASLGTPTPSGGAYSASTSGGSAGSPSSRSEQHA
PDGAGKGAAAPAAASTPASESTFLRLNNLDINGDDAPSLQAPARKKKKRGARAVGPDKGN
RGLRQFSMKVCEKVESKGRTTYNEVADELVAEFSDPSNNIESPDPDNPNAQQYDEKNIRR
RVYDALNVLMAMDIISKDKKEIQWKGLPRTSINDIEELKTELVGLKGRIEKKSAYLQELQ
DQYVGLQNLVQRNEQLYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNST
PFELHDDSYVLKELRFCGREQHTGTQEPSSNGGETSSVPNIYQHPGRPNNGTVRLPSSPP
IPGILKGRVKHEH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcgtcgcgcaccgcccggacgaggacggcgccgcccagcgtccgccgccg
ccggcgggggccggcgcccgggcgtccctgggcacgccgacgccctccggcggcgcgtac
tccgcgtccaccagcggcgggagcgctggctcgccgtccagtcgcagcgagcagcacgca
cccgacggtgctgggaagggggcggcggccccggcggcggcgtccacgccggccagcgag
agcacgttcctccgcctcaataacctcgacatcaacggagacgacgcgccttcgttgcag
gctcctgcgagaaagaagaaaaagagaggagcacgggcagttggtcctgataaaggtaac
cggggattgcgccagtttagtatgaaagtttgtgagaaagttgaaagtaaagggaggaca
acatataatgaggtggcagatgaacttgtcgctgagttttctgatcccagtaataatatt
gaatcacccgatcctgataatcccaacgcacaacaatatgatgagaaaaatatacgaaga
agagtttatgacgctttgaatgttctgatggctatggatattatatctaaagataaaaag
gagatccagtggaagggcttgcctcggactagtataaatgatattgaagaattgaagacg
gagcttgtcggactgaaaggtaggattgagaagaaaagtgcttacttgcaggagctacaa
gaccaatatgtaggtctgcaaaacttggttcaacgaaatgagcagttatacggttcagga
aacacaccttcaggtggagtggctttgccatttatcctggtccagacacgacctcatgca
actgtagaagtcgagatatcagaagatatgcaattggtgcattttgacttcaatagcact
ccatttgagttgcacgatgactcatatgtactaaaagaattgaggttctgtggacgagaa
caacataccggtactcaagagccaagctcaaatggaggtgagacctcaagcgtgccgaat
atttatcagcatcctggaaggccaaataatggtacagttagattaccaagctcgccccct
attccaggaatcctgaaagggcgtgtgaagcatgagcattag
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