Phragmites australis (common reed): 133911631
Help
Entry
133911631 CDS
T10575
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
paua03015
mRNA surveillance pathway
Brite
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133911631
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133911631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133911631
NCBI-ProteinID:
XP_062209945
LinkDB
All DBs
Position
3:3711840..3716196
Genome browser
AA seq
498 aa
AA seq
DB search
MADGGGKAETEKKSWADLEEEEEAKAKAAEAAASSSSTTTGPTVEAQAKQIESLSLTAPE
DDGGEQGPPLLDDSDEAHIHAVTSGGTVYESATMFEDLKLSPELLKGLHDEMGFSRPSKI
QAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDAQRKTPQAICICPTRELAQQN
RAVLTRMGKFTSITCACAIPQAQKDYVPISRMPPITDQVVIGTSGTLIKWITNKKLATRD
IKVLVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFVTKVIRDG
NQIFVKKEELTLEKVKQYKVQVPDEAAKIEVIRDKIFEFGQKVGQVIIFVRTKQSTKNVH
NALTREDYVCSSIQGSLDQSEREKIIQEFKDGYTKVLISTDVLARGFDQAQVNLVINYDM
PIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGETDNVVMKKIEDYFQHKVPEVRN
WDREEDFESALKDAGLLE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcggcggaaaggcggagacggagaagaagtcctgggcggacctcgaggag
gaggaggaggccaaggccaaggccgcagaggcggcggcgtcatcatcctctaccaccacc
ggcccgacggtggaggcgcaggcgaagcagatcgagtcgctctccctcaccgcgccggag
gacgacggcggcgagcagggcccgcctctcctcgatgactccgacgaagcgcacatccat
gccgtgacgtcgggcggcacggtgtacgagtcggcgacgatgttcgaggatctgaagctg
tcgccggagctgctcaaggggctgcacgatgagatggggttcagccgcccgagcaagatc
caggcgatcaccctccccatgatcctcacgcctccctacaaggacctcgttgcgcaggcg
cataacggctccggcaagaccacctgcttcgtccttggcatgctcagccgcgtcgacgcg
caacgcaagaccccccaggccatctgtatttgccccactagggagctcgcgcagcagaat
agggcggtgctcacgaggatgggcaagtttacttccattacatgtgcctgtgcgatcccg
caagctcaaaaagattatgtgccgatttctagaatgcctccaattactgaccaggtggtg
atcggcacttctgggacactcatcaagtggattactaataagaagctggccacaagggat
atcaaggtacttgtgttcgatgaggcggatcatatgcttgctgaggacggctttcggagt
gattctgaaaggatcatgagggatatacaaagaagcgctggtggttgtcaggtgcttctc
ttttctgcgaccttcaatgagagggtgaaggattttgttacaaaggtcattagagatgga
aaccaaatatttgtgaagaaggaagagcttactttggaaaaagtaaagcaatataaagtt
caagtccctgacgaggcggcaaaaatagaggttataagggacaagatctttgagtttgga
caaaaagttggccaggttatcatatttgttagaacaaagcaaagtactaagaatgttcac
aatgctttgacaagagaggactatgtgtgctcctcaattcaaggatcccttgaccaatca
gagagggaaaagataatacaggaattcaaagatgggtacaccaaggttcttatatcaact
gatgttcttgctcgaggttttgaccaagcacaggttaacctggtcatcaattatgacatg
ccaatcaaatttggtacaagagatgaaccagattatgaggtgtacttgcacagaattggc
agagctgggcgctttggccgaaaaggtgctgtgttcaacttgctatgcggtgaaacagat
aatgttgtgatgaagaagattgaggactacttccaacacaaagtacctgaggttcgtaat
tgggatcgtgaggaagattttgagtctgctctcaaggatgcaggtttacttgagtaa
DBGET
integrated database retrieval system
