Phragmites australis (common reed): 133911701
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Entry
133911701 CDS
T10575
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133911701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133911701
03036 Chromosome and associated proteins [BR:
paua03036
]
133911701
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133911701
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133911701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
133911701
NCBI-ProteinID:
XP_062210054
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Position
3:4828710..4833964
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AA seq
1008 aa
AA seq
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MAAGAVFPVLRSLDYFARPSINELVEQEAADPGFCSRVPDFVIGRTGYGQVRFLGNTDVR
GLDLNEIIRFDRHSVVVYKDEADKPSVGHGLNKAAEVTLVLDLKRLPEPSLLVEVLRCRA
KKQGARFLSFNPANGKWKFEVDHFSRFGLVDEEEEDAVMDETAVRQPIAEVRDPPSNGYE
LELSHSLPAHLGLDPAKMQEIRMAMFSNEEVDEDMEDGFPSDHRYLSRERMNVDSPTSSA
KGSRLRSVSPLHASSQKVGRRSGMLANARKEPQALLEYSVNSSELGPSSQGILMSGQNKG
FPVRMTKVEGFKMPAEQESPVAGNIYTNCVVDAALFMGRSFRVGWGPNGILVHSGSLVNS
PGTGLSSVIHLEKVAGDKVVRDEKNKVKEDLAELCFSDPMDLHRSLDHQFLETESDSFKL
KLQKVVANRLVLPDICRSYIDIIERQLEVSDLSMSSRVLLMHQVTVWELVRVLFSERAAA
NQLEPVGDDDQEGMLLDKKEGSVNIDLEALPLVRRADFSNWLQDSVCHRVQEEVGSLSEA
RYLEHILLLLTGRQLDTATEVAASRGDVRLAILLSQAGGSMLNRSDLAQQLDLWKMNGLD
FDYIEEDRLKVYELLAGSVQAALLDSPIDWKRYLGLIMWYQLSPDTPLDIIIRFYQQLLG
EGKVPYPVPVYIDEGPLDEALKWSPGDRFDISFYLMLLHANQGEKFGLLKTMFSAFSSSY
DPLDYHMIWHQRSILEAIGAFSSNDLHLLDLSFVYQLLGLGKCHWAIYVILHMPHLDDAP
YIHEKLIREILSQYCDSWSKDDAQRQYIVELGIPEEWMHEALALYHEYYGDQQGALENFI
QCGNWRKAHTIFMTSVAHSMFLSSKHQEIWDITSALENHKSEIADWDLGAGIYIDYYILK
NSLQQESAMDDSDPLEKKNESCRSFFGCLNDSLLVWGSKLPVEARACYSKMAEDLCDLLV
NSPGEGLAPDLHMDCFQTMLNAPVPDDHKSSYLQEAVSVFTEILCSDS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggtgctgtgttccctgtgctgcgttcccttgattattttgcgaggccatcg
atcaatgagttggttgagcaggaggcggctgatcctggcttctgcagcagggttccggat
tttgttattgggaggacaggatatgggcaggttagattccttggcaacaccgatgtgagg
gggttggacctgaatgaaatcatcaggtttgaccggcattccgtggtggtctataaggac
gaggctgataagccgtcagtagggcatggtcttaataaagcagcagaagttacgttggtg
ctggatttgaagagacttccagagcccagtctacttgttgaggtgctaaggtgtcgagct
aagaagcaaggtgctaggttcctttcgttcaatccagcaaatggcaaatggaaattcgag
gttgatcatttcagtagatttggacttgtggacgaggaggaagaggatgctgtaatggat
gagacagctgttcggcagccgattgctgaagtaagagacccaccttcaaatggttatgaa
cttgagctctcacattcattacctgctcatcttgggcttgaccccgcaaagatgcaagaa
ataaggatggcgatgttttccaatgaggaagtcgatgaagatatggaggatggtttccca
tctgatcacaggtaccttagcagagaaaggatgaatgtggattcacccacctcaagtgct
aaaggttcgaggttgaggtctgtctctcctttgcacgcatcttcccagaaggtcggtagg
agatctggtatgcttgctaatgctaggaaagaaccacaggcactactggaatacagtgta
aattcttcagagcttggtccatcttcgcagggtattcttatgtctgggcaaaacaaggga
tttccagtgagaatgaccaaggtggaaggctttaagatgccagctgagcaagaatctcct
gttgctggaaacatatacaccaattgtgtagtggatgctgctttatttatgggtagatcg
tttcgtgttggttggggaccaaatggcatacttgttcattcgggtagtctggtcaatagt
cccggaactggtctatcttccgttattcacttagagaaagttgcaggtgataaagttgtg
cgtgatgagaaaaacaaagttaaggaggacctagcagaactatgtttctctgatcctatg
gacctccataggagtcttgatcatcaatttctggagactgagtctgactcttttaaatta
aagcttcagaaagttgtggcaaatcgtttggttttaccagatatctgcaggtcttatatt
gacatcattgaaaggcagcttgaggtcagcgatttatctatgtcttcccgtgtgctgtta
atgcatcaagttacagtctgggagttagttagggtcttgttctctgaaagagcagctgct
aaccagttagagcctgttggcgatgatgatcaggaaggcatgcttctggacaagaaagaa
ggctctgtcaacatagaccttgaagcactccctttggttaggagagcagactttagcaac
tggttacaggacagtgtttgtcatcgggtacaagaggaggtgggctccttaagtgaggcc
aggtacttggaacatattcttcttcttttgactggtcgacaattagacacagccacagaa
gttgcagcttccaggggtgatgtacggttggcaatcttgctaagtcaggcaggtggatca
atgttaaatcgatctgaccttgctcagcaactggatctgtggaaaatgaatggtctggat
tttgattatattgaggaagacaggctaaaggtatatgagttgcttgctggcagcgtacag
gctgctttactagattcaccaattgactggaaaaggtacctcggtttgatcatgtggtat
caattatcacctgatacacccctcgatattatcattcgcttttaccagcaactccttggt
gagggcaaagttccttatcctgtacctgtatatattgatgaaggacctcttgatgaagca
cttaagtggtccccaggtgaccgttttgacatctctttttacctaatgctccttcatgcc
aatcaaggtgagaagtttgggctgctaaaaactatgttcagtgcattctcatcttcatac
gatcccttggactaccatatgatctggcatcagcgttctattttggaagctattggtgct
ttcagttcaaatgaccttcacttgctagatttgagttttgtttatcaattacttggtctt
gggaagtgccattgggctatctatgtcattctacatatgccgcatcttgatgacgcccca
tacatccatgagaagttaataagggaaattttatcacagtattgtgactcatggagtaaa
gatgatgctcagaggcaatatattgtagaacttggtataccagaagaatggatgcatgaa
gctctggctctttatcatgaatactatggagatcagcagggcgcactggagaattttatt
cagtgtggcaattggaggaaggctcatactattttcatgacttctgttgctcattccatg
tttctttcatcaaaacatcaggagatctgggacatcacaagtgctttggagaatcacaag
tctgaaattgctgactgggaccttggtgctgggatatacatagattattacatcctaaag
aactcactgcaacaagaaagtgccatggatgattcagatccacttgagaagaaaaatgag
tcatgcagaagtttctttggctgtttaaatgattcattgctagtttggggaagcaaacta
cctgttgaggcgagggcatgctactcgaagatggcagaggacctatgcgatcttctagtg
aactcccctggtgagggtttggcgccggatctccacatggactgctttcagacgatgttg
aatgctcctgtccctgatgaccacaagtcatcatacctgcaggaggcagtctctgttttc
accgagatactgtgcagtgattcatga
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integrated database retrieval system
