Phragmites australis (common reed): 133911788
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Entry
133911788 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4-like
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133911788
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133911788
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133911788
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133911788
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133911788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
133911788
NCBI-ProteinID:
XP_062210175
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All DBs
Position
3:complement(5894351..5899322)
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AA seq
436 aa
AA seq
DB search
MTKKVGWTEAKNHFFLAIFPLLSSDLRSQQFHCASTIPCLAPLEPKIAIAPIAPSRRGGP
AGNGSWAGAVMGAASSRLEKALGEQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQ
LLEYYANNKSTGDGEENMLTCLADLFSQITNQKKKTGVIAPKRFIQRLKKQNEIFRSYMH
QDAHEFLNFLLNELVDILEKEQKAVRDSLQNLSLQKNSNGPINGQADGSHKELAATWVHK
CFQGILTNETKCLRCETVTDRDETFFDLSLDIEQNNSLTSCLKNFSSTETLNAEDKFFCD
KCCSLQEAQKRMKIKKPPNILVIHLKRFKYIEELGRYKKLSYRVVFPLELKLLNTVDNSD
LEYSLFAVVVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMTDESMVQAFFGSAQELSGN
TDNGYILLYESLAEKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaaggtcggttggacagaggccaaaaaccatttcttccttgcgatattcccc
ctcctttcctccgacctccgatcccaacagtttcactgtgccagtacaattccctgtctc
gcaccgctcgagccaaaaatagcgatcgcgccgatcgcgccgagccgtcgcggtgggccg
gcgggcaatgggagttgggcgggggcggtgatgggcgcggcgagctcgaggctggagaag
gcgctgggcgagcagttccccgagggcgagcgctacttcggcctcgagaacttcggcaac
acttgctactgcaacagcgtcctgcaggcactttacttctgtgttcctttccgtgatcaa
ttactggagtactatgcaaacaataaaagcaccggagatggtgaagagaacatgctaacc
tgcttggctgatctgttctctcagataactaatcagaagaagaaaacaggggttattgca
cctaaacgttttatacaacgattgaagaagcagaatgagattttccgcagctatatgcat
caggatgctcacgaatttctgaattttctgctgaatgagctagttgacattctagagaaa
gaacaaaaggctgtgagagactctcttcaaaatctttcgttgcaaaagaattcaaatggc
cctattaatggtcaagccgatggtagtcacaaagaactagctgccacatgggtccataaa
tgcttccagggaatattgactaatgaaacaaaatgtctgagatgtgaaactgtgactgat
agagatgaaacattttttgacctgagcctggacattgaacagaataattcgctcacgagt
tgtcttaagaacttcagctcaacagagactttgaatgctgaggataagttcttctgcgac
aaatgttgcagtttacaggaagcacagaaaagaatgaagataaagaaaccaccaaacatc
ctggtaattcatctcaagcgtttcaagtacattgaggagcttgggcgctacaaaaagctg
tcataccgagtggttttccctctagagcttaaactcctcaacactgttgacaactcagac
ttggaatactccctttttgccgtggttgtgcatgttggaagtggaccaaatcatggccac
tatattagcttggttaagagccacaatcattggttgttcttcgatgacgagaatgttgag
atgactgacgagtccatggtacaggcattcttcggctcggcacaagagttaagtggtaac
actgataatggctacatactcttatatgaaagccttgctgaaaaaagttga
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