Phragmites australis (common reed): 133911884
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Entry
133911884 CDS
T10575
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00531
Glycosaminoglycan degradation
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
133911884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
paua00536
]
133911884
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
133911884
Glycosaminoglycan binding proteins [BR:
paua00536
]
Heparan sulfate / Heparin
Enzymes
133911884
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
133911884
NCBI-ProteinID:
XP_062210321
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All DBs
Position
3:7364315..7368344
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AA seq
540 aa
AA seq
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MELRLLLLALICLHAPRWASAPQPEDATVIVKGSSRIAETDENYVCTTIDWWPPEKCNYN
QCPWGQSSILNLDLDHPFLAQAIQAFDNLRIRLGGSLQDRVVYDVGTDSPCSPFRNMSNG
LFGFSIGCLTMDRWDKLNDIFQKTGAIVTFGLNALYGRYNVRRYVWAGKWNSTNAYDFVK
YTISKGYPVDSWEFGNELSGHGIGAKVDAKLYGKDVVELKSILRQLYVAPMSQPLLLAPG
GFFDQQWYSQLLQTSGHGVVSALTHHVYNLGGGDDVHLIRKILDPKYLDRAEDTYRDMQL
TIQRHGTWASAWVSESGGVFNNGGLLVSNTFINSIWYLDQLGMASKYNTKVFCRQTLIGG
HYGLLDSQTFLPNPDYYSALLWHRLMGNGVLSVDINAPRPLRAYAHCRKQKLGITFLLIN
LSNTTGYNVTLQNDINVSLDKRPDLKKRSSFTHRLKRAVSWLGRKPSSDTRKREEYHLTA
KDGDLQSKTMLLNGVPLELGDDGSVPALDPVLVAVDSPVYLAPTSIAFVVLPKFEAKACS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaggctgctgcttcttgcgctcatctgtctgcatgctcctcgttgggcttcg
gctccgcagccggaggacgcgacggtcatagttaaaggatcaagtaggattgctgaaacc
gatgagaattacgtgtgcactacaattgactggtggccgccggagaagtgcaactacaat
caatgtccatggggtcagtcttcaattctgaatttggatttggatcacccatttctggct
caagcaattcaagcatttgataatctgaggattaggctgggaggatccttgcaagaccga
gtggtttatgacgtgggaacagatagtccatgctccccgttcagaaatatgtccaatggc
ttgtttggtttctcaattggttgcctaactatggataggtgggacaagctgaatgatata
ttccagaaaacaggagcaattgtcacatttggtctgaatgcactctacggaaggtataat
gttcgacgttatgtctgggcaggcaaatggaactccacaaatgcatatgattttgtaaaa
tacacgatctcaaagggatacccagttgactcatgggaattcggcaatgagctgagtggg
catgggatcggggcaaaagtcgatgctaaactttatggaaaggatgtagttgaacttaaa
tctatccttcggcaattgtatgtggctccaatgtcccagccactcctgttagcccctgga
ggattctttgatcaacagtggtactctcagctacttcagacttcaggtcatggtgttgtc
agtgccttaacgcatcatgtatataatcttggtggaggggacgatgttcatcttataagg
aagatcttagatccaaagtacttagatcgtgctgaagatacttatagagacatgcaactt
accatccaaaggcatggaacatgggcttctgcttgggtcagtgaaagtggaggtgtattc
aacaatggtggtctgctggtgtcaaatacattcatcaatagcatctggtatctggatcag
cttggaatggcatctaagtacaatacaaaagtgttctgcaggcagactctcatcggtggc
cactatggtctgcttgactcacaaacatttttgccaaatcctgattactacagtgctcta
ctatggcatcggcttatgggcaatggagttctttcagttgatatcaatgcaccacgtccg
ttacgtgcttatgctcattgtaggaaacaaaagctaggcatcacttttctcttgatcaac
ctaagcaacactactggatacaacgtcactctccagaatgacatcaatgtcagcctcgac
aaaagacccgacctcaaaaagcgcagttctttcacgcacaggctcaaaagagcagtttca
tggctggggaggaaaccatcaagcgacaccagaaagagggaggagtatcatctgacggcc
aaggatggggacctccagagcaagacgatgctgctcaacggcgtcccattggaactggga
gatgatggcagcgttccggccctggatccggtgcttgttgctgtcgactcgcctgtatac
ctagcaccaacatcaatcgcctttgttgttctaccaaagtttgaggctaaggcttgttct
taa
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