Phragmites australis (common reed): 133912198
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Entry
133912198 CDS
T10575
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133912198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133912198
04147 Exosome [BR:
paua04147
]
133912198
04090 CD molecules [BR:
paua04090
]
133912198
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133912198
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133912198
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133912198
CD molecules [BR:
paua04090
]
Proteins
133912198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
AAA_30
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
133912198
NCBI-ProteinID:
XP_062210791
LinkDB
All DBs
Position
3:complement(12467833..12476135)
Genome browser
AA seq
1413 aa
AA seq
DB search
MVPTGLFGWASPHVQPLTPVSEVSEPPESPSPYGDGPAGDAGVGAREGEGAGSGEEEVED
DEVEPPPAAVSFWRLFEFADGVDWVLMAAGALAAAAHGAALVVYLHYFGRALNLLDSERV
GSALHGRSDELLHQFKEHALYIVYIAAGVFIAGWIEVSCWILTGERQTAVIRSKYVQVLL
NQDMSFFDTYGNNGDIVSQVLSDVLLIQSAISEKVGNYIHNMATFVGGLIVGLLNCWQIA
LLTLATGPLIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAISYIRTLYAFTNETLAKY
SYATSLQATLRYGILISLVQGIGLGFTYGLAICSCALQLWVGRHLIARGKADGGEVVVAL
FAVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSSTNQEGITLPQVQGNIEFRNV
YFSYLSRPEIPILSGFFLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGEN
IKNLKVEWLRSQIGLVTQEPALLSLSIRENIAYGRSATFDQIEEAAKTAHAHGFISSLEK
GYETQVGRAGIALTDEQKIKISISRAVLSNPSILLLDEVTGGLDFEAEKAVQEALDVLML
GRSTIIIARRLSLIKNADYIAVMEEGHLVEMGTHDELLNLDVLYAELLRCEEATKLPKRM
PTKNSKERKSLQIEDASVSQYFQESSSPKMAKSPSLQRTHGMLQFWRSDTNRNSHDSPKD
RSPPSEQTIDNGIPMVATKTERTPSIKRQDSFEMELPDLPKVDVHPIQRQTSKNSEPDSP
ISPLLTSDPKNERSHSQTFSRPQSERDDTSSEQSELDEVQHHKPPSFWRLAGLSIAEWPY
ALLGTIGAAIFGSFNPLLAYTIALIVSAYYQIEVRDMQHEVNRWCLFIVGMGVITVLVNW
LQHFYFGIMGEKMTERIRRMMFSAMLRNEVGWFDKEENNADTLSMRLANDATFVRAAFSN
RLSIFIQDTAAVSVALLIGMLLGWRVALVALATLPVLVISAIAQKLWLAGFSKGIQEMHR
KASLVLEDAVRNIYTVVAFCAGNKIMELYRLHLGKILKQSLVHGLAIGFGFGLSQFLLFS
CNALLLWYTAISVDRQRMTIATGLKQYILFSFASFALVEPFGLAPYILKRRKSLTSVFEI
IDREPKIDPDDTTGLKPPNVYGSIEFKNVDFSYPARPEILVLSNFNLKVSGGQTVAVVGV
SGSGKSTIISLIQRFYDPVSGQVLLDGRDLKSFNLRWLRSHMGLIQQEPVIFSTTIRENI
IYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN
APILLLDEASSAIESESSRVVQEALDTLVMGNKTTILIAHRAAMMKHVDNIVVLNGGRIV
EQGTHDTLMDQNGLYVRLMQPHFGKGLRQHRLM
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgacggggctgttcgggtgggcgtctccgcacgtgcagccgctcacgcccgta
tccgaggtctccgagccgccggagtcgccgtcgccgtacggggacgggccggcaggggat
gcgggggtgggagcgagggagggggaaggcgcaggctccggcgaggaggaggtggaggac
gacgaggtggagcccccgccagcggcggtgtcgttctggaggctcttcgagttcgccgat
ggggtcgactgggtgctcatggccgctggggcgctcgctgctgctgcgcatggcgcggcg
ctcgttgtgtacctgcactacttcggaagggccctgaatttgctcgactctgagcgggtt
gggtctgctctccatggacgtagcgatgagctcctccaccagtttaaggagcatgctttg
tatatcgtctatatagctgctggtgttttcattgcgggatggatagaggtatcatgctgg
attctcactggggaacggcagactgctgtcatcagatcaaaatatgttcaggtcttgcta
aatcaagacatgagcttctttgatacatacggaaacaacggtgatatagttagtcaagtg
ctcagtgatgtattgctcattcagtcagctataagcgagaaggttggaaactacatacac
aatatggctacatttgttggtggtctcattgttggcctgctcaattgttggcaaatagca
cttctaactcttgccactgggcccttgattgttgcagcaggaggaatatctaacatattc
cttcataggctggctgaaaacattcaagatgcatacgctgaagcggctggtattgctgaa
caggccatctcatacatcaggacactgtatgcttttacaaatgaaactcttgcaaagtac
tcctacgccacctcacttcaagccacactgagatatggaattttgataagccttgtccaa
ggaattggccttggatttacatatggacttgccatttgctcttgtgctttgcaactttgg
gttggaagacacctgattgctcgtggaaaagctgatggtggtgaagttgtggtagcttta
ttcgctgtaattctgagcggccttggtttgaatcaagcagctacaaacttctattcattt
gagcaagggcgcattgctgcttatagactatatgaaatgattagccgctcaacttccagc
accaaccaagaaggaatcaccttaccccaagtgcaggggaacattgaatttagaaatgtg
tattttagctacctgtctcgtcctgaaattccaattttaagtggtttcttcctcactgta
cctgctagaaaaactgttgcacttgttggtagaaatggctcagggaaaagcagcataatt
cctctaatggagagattctatgatccaacattaggggaagttcttttggatggggaaaac
ataaaaaatttgaaagtagaatggttaagaagccaaattggtctggtgacgcaggaacca
gctttattgagtttgagcattcgggaaaatatagcttatggaagatctgctacctttgat
cagatagaagaagcagcgaagacagcacatgcccatgggttcatcagttcacttgaaaag
ggatatgaaacccaggttggtcgagctggtatagcactgactgatgaacagaagatcaaa
atttctatttcccgtgctgtgctttcaaatccatccattctcttgcttgatgaggtcacg
ggaggacttgatttcgaagctgaaaaggctgtccaagaagcattagatgttctcatgttg
ggaaggtcaaccattataattgctagacgtcttagcctcattaaaaatgctgattacata
gctgtgatggaggaggggcatctcgttgaaatgggtacacatgatgaattgctgaacttg
gatgtcctttatgctgagcttttaagatgtgaggaagcaacaaaactgcctaaaaggatg
cccaccaagaatagcaaggagcgcaagtcactccaaattgaggacgcatcagtgagtcaa
tactttcaagaatcatcctctcctaagatggcaaaatcaccttcacttcaaagaacacat
ggcatgcttcagttttggcgatcagataccaacagaaactctcatgattcaccaaaggat
cgaagtccaccttcagaacaaactatagacaatgggatacctatggttgcaactaaaact
gaaagaacaccgtccatcaagagacaagatagttttgaaatggaattgcccgatcttccc
aaagttgatgtccatcctatacagcggcagacatctaagaattcagaacctgactcgccc
atatctcctcttttgacttctgatcctaagaatgagcgttcacattcacaaacatttagt
agaccacagagtgaacgagatgatacgagttctgaacagagtgaattagatgaggttcag
caccacaaacctccttctttttggcgacttgcaggacttagtattgctgaatggccttat
gctcttttaggtacaattggtgctgctatatttggctcgtttaatccacttcttgcttac
acaatagcacttatagtgtcagcatactatcaaatagaagttcgtgatatgcaacacgaa
gtgaacaggtggtgcttattcatagtaggcatgggtgttattacagtgctggtcaactgg
ttgcaacatttttattttggaattatgggggagaagatgaccgagcgcataagaaggatg
atgttctccgcaatgctgcgcaatgaagttggatggtttgacaaagaggagaacaatgct
gatacactgtccatgcgcctggcaaatgatgctacatttgtccgtgctgccttcagtaac
cgtctttccatattcatacaagacactgctgcggtatctgtggctcttcttattggaatg
ttgttgggatggcgtgtggcacttgttgcacttgcaactttaccagttcttgttatctct
gctattgcacagaaattgtggcttgctggcttctcaaaaggaatccaggagatgcataga
aaggcttcattagtacttgaagatgcagtccggaacatatacactgtagtggcattctgt
gctgggaacaagataatggaactatacagattacatcttggtaagatactgaagcaaagt
cttgtgcacggattggctataggctttggcttcggtctctcgcagtttcttcttttctcc
tgcaatgccctacttctttggtacactgccatttcagtggaccggcagcgtatgacaata
gccacgggactaaaacagtacattctcttttcatttgcatcattcgcactggtggagccc
tttggacttgcaccttacatacttaaacggaggaagtctctgacgtcagtgtttgaaatt
attgaccgggagccaaagattgatcctgatgataccactggcttgaaaccaccaaatgtc
tacggaagcattgaattcaagaatgtcgatttctcttatcctgcgcgccctgaaattctt
gtgctgagcaattttaatcttaaggtgagtggtgggcaaacagttgcagtggtaggggtt
tcaggatcagggaaaagcactattatttcgttgatccagagattctatgacccagtttct
ggccaagttctgctggatggtcgagatctgaaatcatttaacctaagatggttgcgtagc
catatgggtctgattcagcaagagcctgttattttctcaacaacaataagagaaaacatt
atttatgcaaggcacaatgcaacagaggctgagatgaaggaagctgcgaggatagcaaat
gctcaccatttcatcagtagcttgccacatggctatgacactcatgtgggtatgagaggg
gttgatctcacacctgggcaaaagcaacggattgccattgctcgggtggttttgaagaac
gcaccgatattgttgttggacgaggccagctctgctatcgagtccgaatcaagtagagtg
gtacaggaagctctcgacactttggtcatgggtaacaagacaacaattcttattgcacac
agggctgcgatgatgaagcatgtggataacattgttgtcctaaatggtggtaggatagtt
gagcagggtacacatgacactctgatggaccagaacggtctatatgttagattgatgcaa
cctcattttggcaagggccttcggcagcatcggctaatgtaa
DBGET
integrated database retrieval system
