Phragmites australis (common reed): 133912276 Help Entry 133912276         CDS       T10575                                  Name (RefSeq) transcription factor bHLH140   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism paua  Phragmites australis (common reed) Pathway paua03410   Base excision repair Brite KEGG Orthology (KO) [BR:paua00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     133912276  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:paua03400]     133912276 Enzymes [BR:paua01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      133912276     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      133912276     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      133912276 DNA repair and recombination proteins [BR:paua03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      133912276   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      133912276 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C AAA_33 Macro zf-C2HE HIT AAA_18 AAA nSTAND3 Zeta_toxin AAA_24 AAA_16 AAA_19 ABC_tran AAA_29 SMC_N HTH_AAA_fung AAA_5 NB-ARC AAA_22 AAA_25 MeaB Mg_chelatase MMR_HSR1 NACHT Motif Other DBs NCBI-GeneID:  133912276 NCBI-ProteinID:  XP_062210916 LinkDB All DBs Position 3:13504847..13508935 Genome browser AA seq 788 aa AA seqDB search MDPGAGGSVSAPPPPATSPGVEAKEVVKSGGKQVVVVLVGPPGSGKSTFAEAVLGGSAAC RPWVRVCQDIIGNGKAGTKIQCLKALADALKEGKSVLIDRCNLERKQRADFVKLGSTMHA DVHAIALDLPAKVCISRAVSRTGHEGNLQGGKAALVVNRMLQKKETPLLTEGFSRIMFCN DDGDIKKAVDMYNGLGPLDSLASGVFGQKSKGPIQIGIMKFLKKAGTSSVEKSSGPKLTF SERKPGQQNPLPEQEKVEAGFACSMEVKELNVKKENEGQAKESSANDIGSHTLAFPSIST ADFQFDLDRASDIIVETAADFLQKFDNIRLVLVDLSKKSRILSLVKDKAAKKSIDSRRFF TFVGDITQLRSKGGLQCNVIANAANWRLKPGGGGVNAAIFDAAGEALQHATKECADTLRP GSSVVVPVPLTSPLHQWEGVTHVIHVLGPNMNPMRPDYLKNDYTEGCKILHEAYNSLFEN FASVVQSDMMGNQNNGCIADKSASGATTPSDSKMKREDSHESVRMKKHKLLQPILTSKQQ HKCPGANAPNYHENSMGSSDAPNQATEADNKKSGVVASKSWGSWAQALYELAMHPEKYKN SDSILEISSEFVVLKDLYPKAKKHVLVISRTNGLDSLADAKKEHLPLLRRMYSTGVKWAQ KFLEEDASLVFRLGYHSVPSMRQLHLHIISQDFNSASLKNKKHWNSFTTVFFRDSVDVIE EIEQHGSAITSSDDKVLAMELRCHRCRSAHPNIPKLKSHIANCKSPFPSHLLQKNRLLLS STMHTDCS NT seq 2367 nt NT seq  +upstreamnt  +downstreamnt atggatcccggcgcggggggctccgtctccgcaccaccgcctcctgcgacaagcccaggt gtggaggcaaaggaggtggtgaagagcggtggcaagcaagtggtcgtggtcctggtgggc ccaccgggaagcggcaagtccacgttcgctgaggccgtcctaggtggctccgccgcctgc cgcccgtgggttcgcgtctgccaggatataattggaaacggcaaagctgggacaaaaata cagtgcttgaaggcattggcggacgctttgaaggagggcaagagtgttctcattgaccgc tgcaacttggaacgtaagcagcgcgctgattttgtgaagcttggcagcaccatgcatgcg gatgtgcatgccattgccctggatctccctgcaaaggtttgtatctcacgtgcagtgagc cgaacaggccatgaagggaatctgcagggtggaaaagctgcacttgttgtgaaccgcatg ctgcagaagaaggagacacccttgcttactgaaggtttcagtcggatcatgttctgtaat gatgatggtgacattaaaaaggcagttgatatgtataatggattagggcctttagatagt cttgcatcaggagtttttggtcagaagagcaaaggacctatacaaattggtataatgaag tttctaaagaaggctggtacttccagtgttgagaaatccagtggacctaagcttacattc agtgaaaggaagccagggcagcaaaatcctttgccagaacaggaaaaggttgaagctggg tttgcctgctcaatggaagttaaggagttgaatgtcaagaaggaaaatgaagggcaagct aaagaaagtagtgctaatgacatcggttctcacactctggcatttccatctatttctact gctgacttccagttcgatcttgacagagcttccgacattatagtagaaacagctgctgat ttcttgcagaagtttgataatataagactagttcttgtagacctgagcaagaaatcgaga atattgtcactggtcaaggacaaggctgctaagaagagcattgactccaggaggtttttc acatttgtgggagatatcactcaattgcgctcgaaaggaggtcttcagtgcaatgtgatt gctaatgctgctaactggaggttaaaacctggaggtggaggggttaatgcggcaatattc gatgctgctggagaagctttacaacacgcaaccaaagaatgtgctgacacattgagacct gggagctctgttgttgttccagttccattgacttctcctctgcatcaatgggaaggcgtg acccatgtgatacatgtgctcgggccaaacatgaacccaatgcgaccagattatctgaag aatgactatactgaagggtgtaagattcttcatgaagcatataattctctttttgagaac tttgcatctgttgtccagagcgacatgatggggaaccagaacaatggatgtatagcagac aagtcagcatctggagcaacaacacccagtgattcaaaaatgaagagagaagacagccat gaatctgtaaggatgaaaaaacacaagttgcttcaacctattctgacctcaaagcaacaa cataagtgcccaggggctaacgcaccaaactaccatgaaaactccatgggatcatctgat gctccaaaccaagctacagaggcagacaacaagaagagtggtgtggttgccagtaaaagt tggggatcttgggcccaggctctatatgaacttgccatgcacccggaaaaatataagaac tcagattctatcctggagatatcttctgaatttgttgttctgaaagatctttatccaaag gccaaaaagcatgtcctggtgatatctaggacgaatggtcttgactcgttagcagatgcc aagaaagaacacttgcctttgctgaggaggatgtattcaactggggtgaagtgggcgcag aagttcttagaggaagacgcatctttggtattcaggcttggataccattcggttccatct atgcggcaattgcaccttcacatcattagccaggatttcaattcggcgagcttgaaaaac aagaaacactggaactcctttaccactgtgtttttccgtgattctgtcgatgtcattgaa gagatcgaacaacatggatcagcaatcaccagcagtgatgacaaggtgctcgcaatggag cttcggtgccacagatgtaggagcgcgcatccaaacatcccaaagttaaaatcccacatt gcgaactgtaaatccccattcccttcccatcttctgcagaaaaacaggctgctgttgtcg tcgacaatgcatacggattgcagttag

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