KEGG   Phragmites australis (common reed): 133912307
Entry
133912307         CDS       T10575                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133912307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133912307
Spliceosome [BR:paua03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133912307
 Complex B
    133912307
 Complex C
   U2 SnRNP specific factors
    133912307
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_SRRT RRM_occluded DUF4523 xRRM RRM_10 RRM_PARP14_3 RRM_YTH1 Med19
Other DBs
NCBI-GeneID: 133912307
NCBI-ProteinID: XP_062210957
LinkDB
Position
3:complement(13870299..13875524)
AA seq 233 aa
MLSGDIPPNQTIYLRNLNEKVKKEELKRSIYALCSQYGKILDVVALKTQNLRGQAWVVFS
EITAATNAFRGLQDFDFYGKRMRVQYAKTKSDCIAKEDGTYAPKEKRKKQEEKAAERKRR
AEDEQQSGPNTAAAQSNGSGYQASRLGKTPQEPPAPPNNILFIQNLPDQTTSMMLQILFQ
QYPGFREVRMIEAKPGIAFVEFEEDSQSMVAMQALQGFKITPENPMAVSYAKK
NT seq 702 nt   +upstreamnt  +downstreamnt
atgctgtccggcgacatccccccgaaccagaccatctacctcaggaacctcaacgagaag
gtcaaaaaagaagagttgaagagatcgatttatgcattgtgctcacaatatggaaaaata
ctggatgtggtggccttaaaaactcaaaatctaagggggcaagcatgggtggtgtttagc
gaaattacagctgctaccaatgctttccgtggactgcaggacttcgatttctatggcaaa
agaatgcgagtacaatatgcaaaaacaaagtccgactgtattgcaaaagaagatggtact
tatgctcctaaggagaaaaggaagaagcaagaggagaaagctgctgagagaaaacgacgg
gcagaagatgaacaacagtctggtcccaatactgctgctgctcaaagcaatggaagtggc
tatcaagcatctcgtctgggtaagactccacaagaaccacctgctcctccgaacaatatc
cttttcatccagaacttgccggaccagaccacaagcatgatgctccagatcctgttccag
cagtaccctggtttccgggaagttcggatgatcgaagccaagccaggcattgctttcgtg
gagttcgaggaggacagtcagtccatggttgcaatgcaagccctccagggtttcaagatc
acccccgagaatcccatggctgtatcttatgccaaaaagtga

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