Phragmites australis (common reed): 133912357 Help Entry 133912357         CDS       T10575                                  Name (RefSeq) phytochrome B-like   KO K12121   phytochrome B Organism paua  Phragmites australis (common reed) Pathway paua04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:paua00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     133912357 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PHY PAS PAS_2 GAF HATPase_c HisKA PAS_4 PAS_9 PAS_8 Motif Other DBs NCBI-GeneID:  133912357 NCBI-ProteinID:  XP_062211028 LinkDB All DBs Position 3:14905268..14912433 Genome browser AA seq 1164 aa AA seqDB search MASGSRATPTRTPSSARPEAQRHAHHHHSQSSGGSTSRAGGGGAGTAATESISKAVAQYT LDARLHAVFEQSGASGRSFDYSQSLRGPPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVA DDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAF AAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPTRTEDPALSIAGAVQSQKLAV RAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRADLETYL GLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLPQPLCLVGSTLRAPHGCHA QYMANMGSIASLVMAVIISSGGDDEQTARGSISSTMKLWGLVVCHHTSPRFIPFPLRYAC EFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG AALYYHGKYYPLGVTPTEFQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGASALGDAVCG MAVAYITSSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP WENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELQGINELSSVAREMVR LIETATVPIFAVDTNGCINGWNAKIAELTDLSVEEAMGKSLVNDLIFKESEEIVDKLLSR ALRGEEDKNVEIKLKTFGSEQSRGPIFLVVNACSSRDYTKNIVGVCFVGQDVTGQKVVMD KFVNIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVIGKLLIGEVF GNCCRLKGPDALTKFTIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSKMDGKAN GAFCFLHIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIQFTNSLLQTTDL NDDQRQFLETSSACEKQMSKIIKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMILLR ERDLQLIRDIPDEIKDASAYGDQYRIQQVLSEFLLSMVRFAPTENGWVEIQVRPNVKQNS DGTDTMLFLFRFACPGEGLPPDIVQDMFSNSRWSTQEGIGLSICRKILKLMGGEVQYIRE SEQSFFRVVLDLPQSRPAASREIS NT seq 3495 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgggcagccgcgccacgcccacgcgcaccccctcctccgcgcggcccgaggcg cagcggcacgcgcaccaccaccactcgcagtcgtcgggcgggagcacgtcccgggccggc gggggcggcgcgggcacggcggccacggaatcgatctccaaggccgtggcgcagtacacc ctggacgcgcgcctccacgcggtgttcgagcagtcaggtgcgtcgggccgtagcttcgac tactcccagtcgctgcgcgggccgcccaccccgtcctccgagcagcagatcgcagcctac ctctcccgcatccagcgcggcggccacatccagcccttcggatgcacactcgccgtcgcc gacgactcgtccttccgcctcctcgccttctccgagaacgccgccgacctgctcgacctg tcgccgcaccactccgtcccctcgctcgactcctccgctgtgcctcctccagtctcgctc ggcgccgacgcgcgcctcctcttcgccccctcgtccgccgtcctcctcgaacgcgccttc gctgcgcgcgagatctcgctgctcaacccgctctggatccactccagggtctcctccaag cccttctatgccatcctccaccgcatcgacgtcggcgtcgtcatcgacctcgagcccacc cgcaccgaggaccccgcgctctccatcgccggcgcagtccagtcccagaagctcgcggtc cgcgccatctcccgcctccaggcgctaccgggcggggacgtcaagctcctctgcgacacc gtcgtcgagcacgtccgcgagctcacgggttatgaccgtgtcatggtgtacaggttccat gaagacgagcacggggaagttgtcgccgagagccgccgcgccgacctggagacgtacctt gggttgcattatcctgccacggatatcccgcaggcgtcgcgcttcctattccggcagaac cgcgtgcggatgattgctgattgccacgccacgccggtgagggtcatccaggatcctggg ctgccacagccgttgtgcttggttggctctacgctgcgcgcaccacacgggtgtcacgca cagtacatggcaaacatggggtccatagcatcgcttgttatggcggtgataattagtagt ggtggtgatgatgagcagacggcgcggggcagcatctcatcgacaatgaagctgtggggg ttggtggtatgccaccacacatcaccacggtttatccctttcccattgaggtacgcttgc gagttcctcatgcaggcctttgggctgcagctcaacatggagttgcagcttgcgcaccag ctgtcggagaagcacatcctgcgaacacagacactactatgtgacatgctactgcgggat tcaccaactggcattgtcacgcagagccccagcatcatggaccttgtgaagtgtgatggg gctgctctgtattatcacgggaagtactatccactgggtgtcacacccactgagtttcag attaaggatatcattgagtggttgacggtgtgtcatggggactcaacggggctcagcacc gatagcctggctgatgcaggctaccttggtgcttctgcattaggggatgctgtgtgtgga atggcagtagcttatatcacgtcaagtgattacttgttttggttccgatcacacacagct aaggagatcaagtggggtggtgcgaagcatcatcctgaggataaggatgatggtcagcgg atgcacccacggtcatcattcaaggcatttctcgaagtggttaaaagcaggagcctacca tgggagaatgcagaaatggacgcaatacattccttgcagctcattctacgagactccttc agagatgctgcagagggcactagtaactcaaaagccattgtcaatggccaagttcagctt ggggagctagaattgcagggaataaatgagcttagctcagtagcaagggaaatggttcgg ttgatcgagacagcaacagtacccatatttgcagtagatactaatggatgtataaatggg tggaatgcaaagattgccgagttgacagacctctcagttgaggaggcaatgggcaaatca ctggtaaatgatcttatcttcaaggaatctgaggaaatagttgacaagctactctcgcga gctttaagaggtgaggaagacaaaaatgtagagataaagctgaagacatttgggtcagag caatcgcggggaccaatatttcttgtcgtcaatgcttgttccagtagggattacacaaaa aatattgttggtgtttgctttgtcggacaagatgtcacagggcaaaaggtggttatggat aaattcgtcaacatacaaggggattacaaggctattgtacacaatcccaatcctctaata cccccaatattcgcttcagatgagaatacttgttgttcggaatggaacacagcgatggaa aaacttacaggatggtctagaggtgaagttattggtaagcttcttattggagaggtattt ggaaattgttgtcgactaaaggggccggatgcattgacaaagttcacgattgttcttcac aatgcgataggagggcaggattgtgagaagttccctttttcatttttcgacaagaatggg aaatatgtgcaggccttgttgaccgcaaacacgaggagcaaaatggatggtaaggccaat ggagccttttgtttcttgcatattgcaagccccgaattacagcaagcctttgagattcag agacaacaagaaaagaagtgttacgcaaggatgaaagaattggcttacatttgccaggag ataaagaacccacttagtggcatccaatttaccaactccctgttgcagacgactgattta aatgatgaccagaggcagttccttgaaactagctctgcttgtgagaagcagatgtctaag attataaaggacgccagtctccaaagtattgaggacggctctttggtgcttgagaaaggt gagttttctcttggaagtgttatgaatgctgttgtcagccaagttatgatattgttgaga gagagggatttgcaacttattcgagatatccctgatgaaatcaaggacgcatcagcatat ggcgatcaatatagaattcaacaagttttgtctgagtttttgctaagcatggtgcgtttt gctccaaccgaaaatggctgggtagaaatacaagtcagaccaaatgtaaaacaaaattct gatggaacagatactatgcttttcctcttcaggtttgcctgtcctggcgagggcctaccc cctgatattgttcaagacatgttcagcaactcccgctggtcgacccaagaaggcattgga ctgagcatatgcaggaagattctcaaattaatgggcggtgaggtccaatatatcagggag tcagagcagagtttcttccgcgtcgtcctcgacctgccccaatctcggccagcagctagt agagagatcagctga

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