Phragmites australis (common reed): 133912521
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Entry
133912521 CDS
T10575
Name
(RefSeq) chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133912521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133912521
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
133912521
INO80 complex (yeast)
133912521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
DUF6277
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
133912521
NCBI-ProteinID:
XP_062211289
LinkDB
All DBs
Position
3:18416597..18432425
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AA seq
1506 aa
AA seq
DB search
MDPRRAPPRGGGANGGGLSYSTLFSLEPLLNFRVPVPEDVAPYGNSSPNGSASSEGQGSL
LDQYNGINDASHGLHLKRKRHLDGASDDDEADAYNNQITEEHYRTMLSEHVQKYRRSKFK
EGVFGSDPPCAAIPQRKHKNGGKKTTKHRGDFRDVATLDAVEASHEFNGTECISTYGGFN
KLVASLDSTYLDMGDNIRYLVPEGYDKLAPSLNLPVSSDIRVEEHFFKDTLDLRTIAAML
GFDQKFEATNRGGLAEPLPQYESLQERVKIQKFSLKVTEDPFAIPEGTAGRIRRSIISEA
GNLQVHYVKVLEKGDTYEIIERSLPKKQITKKEPSVIMKEESEKAYKLWHSLATKSIPKH
HRNFNALRKKRQVDAKRFSDSCQREVKLKVSRSLKLMRCAAIRTRKLARDMLIFWKRVDK
EQYELRKKEEREAVEALKREEELREAKRQQQRLNFLLSQTELYSHFMRNKAGGSAPPDEV
SVSEPDEEEEDPEEAELKREALRAARHAVSQQKRMTNAFDSEIVRLRQTSESGIPTEDSS
TMDSSKIDLLHPSTMPEKSSVLTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGL
GKTIQAMAFLAHLAEDKNIWGPFLVVAPASVVNNWAEELIRFCPDLMILPYWGSERLVLR
KNINPKRLYRRDASFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLL
SFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGALNE
HQLSRLHAILKPFMLRRVKIDVIAEMTEKKEEIVPCKLSSRQQVFYQAIKNKISLNELLD
GRRGNLNEKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPPFGELHDV
HYAGKRNPITFEIPKLVYEGIICNMEISGNGCGFRSGYLNRLFNIFLPSNIHFSAFPEAN
SSNESVLSSGAFGFIRLTNLSPVEASFLATCSLFERLAFLALQSNRNYVEEIVDAFLDSE
GPDLQFSQNDVMRVRAVARLLLSSTKADPSLLRTKIKTGPSDSPYEALVLSHHDRLVSNI
RLLRSAYAFIPPARAPPINVWCADRNFAYKFADEMHDPWAKKLFLGFARTSEFNGPRQPV
GIHPLIQELHTDLPIPEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLHTLDILLRRLRA
EGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDIFVFLLS
TRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKIL
QRAKQKNAVQELVMKGKHVQDDHLMKQEDVVSLLLDDTQIAHKLKEISMQAKERLKKRRA
KAIKVDKEGDLTLEELDDTTAEAVEQDNTTSKKKKKSHTQPKSHDNDNVDKNAGPPTGGD
NPGSGHTENEQITKPRPKRSKRLMKSMSDDKEPAAATVHVKQADEAENDTTHDFDGTEEV
QDRTPA
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgccgcgctcccccgcgcggcgggggtgccaacggcggcgggctctcctac
tccacgctcttcagcctggagcctttgctgaacttcagggttcctgtaccagaagatgtt
gccccctatgggaatagtagcccgaatgggagtgcaagcagcgaaggtcaaggatccttg
ttggatcagtacaacggtataaatgatgcttcccatggcctgcatctgaagcgaaaaagg
catctcgatggtgctagcgatgatgatgaggcagatgcctataataaccaaataacagag
gaacactaccgtacaatgctgagtgaacatgtccagaagtacaggagatcaaagtttaag
gagggtgtttttggttctgatcctccttgtgcggcaatccctcaaagaaaacacaaaaat
ggtggtaaaaaaactacaaaacacagaggtgatttcagggatgttgcaacattggatgca
gtagaagcctcacatgaatttaatgggacagaatgtattagcacctatggtggttttaat
aagcttgtagcgtcccttgattctacctatttagatatgggggataatatacgctaccta
gttccggagggttatgataagttagcaccatcccttaatctgcctgtttcttctgatata
cgtgtcgaggaacacttctttaaggacacgctagacttgcggaccatagcagcaatgctt
ggttttgaccaaaaatttgaggcaaccaatcgtggtggattagctgaacctttgccacaa
tatgaatccctccaggaaagggtaaagatacagaaattttctcttaaagttaccgaggat
ccctttgcaattccggaaggaacagctgggaggatacgtaggtctattatatcagaagct
ggcaacttgcaggttcattatgttaaagtcttggaaaaaggagatacatatgagattatc
gaacgtagcttaccaaagaagcaaataacgaagaaggaaccttctgtaatcatgaaagaa
gagtcggaaaaggcttacaaactatggcattctcttgctactaaaagcatcccaaagcat
cacaggaatttcaatgctttgcggaagaaacgacaagtagatgcaaaacgtttctctgat
agttgtcaacgggaggtaaagctcaaagtaagcaggtcactgaaactgatgagatgtgct
gcaatacgtacaaggaagctggctagggatatgctgatattttggaaacgagttgacaaa
gagcagtatgaattgaggaaaaaagaagaaagggaagctgttgaagctttgaagcgtgaa
gaggagctacgtgaagcaaaaagacagcaacagaggctaaattttcttctatcacaaact
gagctttatagtcactttatgcggaacaaggctggtggctcagcaccacctgacgaggtg
tctgtctctgagcctgatgaggaagaagaagatccagaggaagctgaattaaagagagag
gctttgagagctgctcggcatgccgtctctcaacaaaagagaatgacaaatgcatttgat
agtgaaatcgtgaggcttcgtcaaacttctgagtctggtattccaactgaagattcatct
actatggactctagcaaaattgatctattacacccctcaacaatgcctgagaaatcatct
gtgctgacaccggagttgtttaagggcgtattaaaagaatatcagttaaagggcttgcag
tggctggttaattgttatgaacagggtttgaatggcattcttgctgatgagatgggtctt
ggcaaaactatccaggctatggcattcttggctcatttggctgaggacaaaaacatatgg
ggcccctttctagtggtggctcctgcatctgttgtgaataattgggctgaggagttgatt
agattctgccctgacctaatgatacttccatactggggctcagagaggctggttcttcgg
aagaacatcaaccccaagcgtctttatcggagggatgctagcttccacattcttattaca
aactatcagatacttgtgaatgaagagaagcttttgagacgtgttaagtggcaatacatg
gtactggatgaggcccaagctataaaaagttcaagcagccagcgctggaaaactttgctg
agctttaactgtagaaatcgtttacttcttactgggacaccaatacagaacaatatggct
gagttatgggcgcttcttcatttcatcatgcccactctgtttgacagccatgaacagttc
aacgagtggttctcaaagggtattgagggtcatgctgaacatggaggagctttgaatgaa
catcagcttagtcggctgcatgctatattgaagccctttatgctccgccgggttaagatt
gatgtcatcgccgaaatgactgaaaagaaagaggaaattgttccctgcaaattgagttct
cgtcagcaagtcttctatcaagctataaagaataagatatctcttaacgagttgcttgat
ggaagacgtggcaatctaaatgaaaagaagttacttagcctgatgaatattgtcatgcag
ctacgcaaggtctgcaatcacccagagctgtttgagcgtaacgagggaagctcttacttt
tactttgctgatatcccaaactctcttctttctcccccatttggggaactgcatgatgta
cattatgcaggcaagagaaatccaataacgtttgagattccaaagttagtttatgaagga
atcatctgcaacatggaaatttctggaaacggttgtggatttcggagtggatatttgaac
aggctgtttaatatatttttgcccagcaatatccatttttcagcctttccggaagctaat
tcatcaaatgagtctgttctatcatctggtgcattcggctttatacgtttaacgaatctg
tccccggttgaagcttccttcttggccacttgttcattgtttgagaggctagcattttta
gcattgcaatcaaataggaactatgttgaggaaattgtggatgcattccttgattcagaa
ggtcccgatctccagttcagtcagaatgatgtcatgagagttcgtgctgttgcacgattg
ttgctttcttctacgaaggctgaccccagtttgcttagaacaaagattaagactggccct
agtgatagcccatatgaagcactggtgctttctcatcatgacaggcttgtctcgaacata
aggcttcttcgttcagcatatgcttttattccaccagctagagccccgccaataaatgtg
tggtgtgccgatcgaaattttgcctacaagtttgctgatgagatgcatgatccctgggcc
aagaaactgttcctgggatttgctcgtacttctgagttcaatggtcctagacaaccagtt
ggtattcatcctctaatacaagaactacatactgatttgcccatccctgagccgatgctg
cagctaccctataggatatttgggtcttctccgcctatgagtaattttgatccagctaaa
atgctaactgattctgggaagctccacaccttagatatactactacggcgcctccgagct
gaaggtcatcgtgtgctcctttttgctcagatgactaaaatgttggacattctggaggat
tacatgaatttcagaaaattcaagtacttcagactcgatgggtcttctgcaatctcggat
cgccgtgacatggtccgagatttccagaataggaatgatatatttgttttcttgttaagc
acaagagctggggggcttggtattaatttgactgctgctgatacagttattttttatgaa
attgactggaatccaacacaagaccagcaggcaatggatagaacacacaggcttggtcag
acaaaggaggtaaccgtgtacagacttatatgcaaagatactattgaggagaaaatattg
caaagagcaaagcagaaaaatgcagtgcaagagttggtcatgaaggggaaacatgtccag
gacgatcatctgatgaaacaagaggatgttgtttcgttacttcttgacgacacacagatt
gcacataagttgaaagaaatatctatgcaggcgaaggaacgactaaagaaaagacgagca
aaggccatcaaggttgacaaagaaggagatttgacgctcgaagagttggatgatacaact
gcagaagctgtagaacaagataacacaaccagcaaaaagaaaaagaagtcacacacgcaa
ccgaagtcacatgataacgacaatgtggacaagaatgcaggcccccctacggggggtgat
aatccagggagtggtcacacagaaaatgaacagattactaaaccaaggcctaaaagatca
aaaagactgatgaagagcatgagtgatgataaggagccagctgctgccactgttcatgtg
aaacaggcagatgaagcggaaaatgacacaactcatgattttgatggtacagaagaggtg
caagatcggactccagcctaa
DBGET
integrated database retrieval system
