Phragmites australis (common reed): 133912530
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Entry
133912530 CDS
T10575
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
paua Phragmites australis (common reed)
Pathway
paua04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
133912530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133912530
Membrane trafficking [BR:
paua04131
]
Endosome - Golgi transport
Others
AP-1 complex
133912530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
HEAT_spiro
Arm_2
Coatomer_g_Cpla
Motif
Other DBs
NCBI-GeneID:
133912530
NCBI-ProteinID:
XP_062211300
LinkDB
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Position
3:complement(18612708..18619229)
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AA seq
898 aa
AA seq
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MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLISDNNPMVVA
NAVAALAEIQDSSVRPIFEINSHTLSKLLTALNECTEWGQVFILDSLSRYKAADAREAEN
IVERVTPRLQHANCAVVLSAVKIILLQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLSSDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLETFPEEPALV
QLQLLTATVKLFLKKPTEGPQQMIQAVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNLLDSSLLDELLANISTLSSVYHKPPESFVSRVKAAPRADDEEFADT
AETGYSESPSQGVDGASPSSSAGTSSHVPVKQPVAASPSAPAPMPDLLGDLMGMDNAIVP
VDEPTAPTGPPLPVLLPSTNGQGLQISAQLARRDGQIYYDISFENGTQGVLDGFMIQFNK
NTFGLAAGEPLQVPPLQPGASARTLLPMVMFQNVSPGAPNSLLQVAVKNNQQPVWYFNDK
FSLHVFFGEDGKMERTSFLEAWKSLPDDNEFTKEYPSSVINSIDAIVEHLAASNVFFIAK
RRNANMDVLYLSAKIPRGIPFLIELTAAVSVPGVKCAVKTPNREMVPLFFEAMEALIK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcacgactccaagtacttctccaccaccaagaagggggagatccccgagctc
aaggaggagctcaactcccagtacaaggacaagagaaaggatgctgtcaagaaagtgatc
gctgctatgactgttggaaaagatgtctcatcattgtttactgatgtcgtgaactgcatg
cagactgagaacttggagctgaagaagctagtatatttatatctcatcaactatgctaaa
agtcaacctgatcttgccatacttgccgtgaacacatttgttaaggattcacaagaccca
aatccattgattcgtgctttagctgttaggacaatgggttgtatccgtgtcgacaaaatc
acagagtatctctgtgatccacttcaaagatgcctcaaggatgatgatccgtatgtgcgg
aaaactgcagctatttgtgtcgctaagctttatgatataaatgctgagctagtggaggac
agaggatttctagaggctcttaaggacttaatatctgacaataatcctatggtcgttgca
aatgctgttgctgctctggcggagattcaagacagtagcgttcggccaatctttgagatt
aacagtcatacactgtcgaagcttctgacagctttgaatgaatgcacggagtggggccaa
gtcttcattctggattctttgtcaaggtacaaagcagcagatgccagggaagcagaaaat
atagtggaacgagttacaccccgtctccaacatgcaaattgtgctgttgttctttctgct
gtcaagataatccttctacaaatggagctcattactagcacggatgtagtccggaatctc
tgtaagaaaatggcgccccctcttgttactcttttgtctgcagagcctgagattcagtat
gtagccttgaggaacattaatttgattgttcaaaagaggcctacaatacttgctcatgaa
attaaggtcttcttttgcaagtacaacgaccctatatatgttaagatggaaaagttggag
attatgataaagctttcctcagatcgaaacatagatcaggtactattggagttcaaagag
tatgcaacagaggttgatgttgactttgtgcggaaagctgttcgtgctattggaagatgt
gcaattaaattggagagagctgctgaaaggtgcatcagcgttttgcttgagctgataaag
ataaaagttaattatgttgtgcaggaagctataattgttatcaaggacatcttcagacgc
taccctaacacgtatgagtctatcatcgcgacgctttgtgaaagtctggacactttagat
gagccagaggctaaggcatcaatgatttggataattggagaatatgctgaaagaattgac
aacgctgatgaacttctcgagagcttcttggaaacattcccagaagaaccggcgttagtt
caactgcagctgctaacggctactgttaaattgtttcttaagaagccaactgaggggccg
caacagatgatacaggctgttctcaataacgcaacagttgaaacggacaatccggatttg
cgggatcgagcttacatatactggcgactcctttctactgatcctgaggctgcaaaagat
gttgttctggcggagaaacctgtgatcagcgatgactccaacctgcttgactcatcacta
cttgatgagctgctagcaaacatttctaccctttcatcagtttatcacaagcctccagaa
tcatttgtcagccgtgtcaaggctgctcctagagctgatgatgaggagtttgctgataca
gctgaaacagggtattcagagtcaccatctcagggagttgatggggcatccccttcctct
agtgctggcacttcttctcatgtaccagtgaagcagccggtagctgcatccccatcagct
cctgctccaatgccagaccttctaggtgatttgatgggtatggataatgcgattgttcct
gtcgatgaacctacagcacctacaggccctccactacctgtcttactgccttcaaccaac
ggccaaggactgcagattagcgcacaactagcgcgccgtgatggccagatatattatgat
atatcttttgagaatggcacccagggagtcttagatggatttatgattcagtttaacaag
aacacctttggtcttgcagctggtgaaccacttcaggttcctccgctgcaaccgggggcc
tcagccaggacacttctacctatggttatgttccagaatgtctccccgggtgcaccaaac
tctctacttcaggttgccgttaaaaataatcagcagccagtgtggtacttcaatgacaag
ttttcactgcatgtcttcttcggtgaagatggaaaaatggagcgaacaagttttcttgag
gcctggaaatctttacctgatgacaatgagtttacaaaagaataccccagctctgtcatc
aacagcatagatgctattgttgaacaccttgcagcatcgaatgtgttctttatagccaag
cgaagaaatgcaaacatggatgttctgtatctctctgcaaagattccccgcggaattccc
ttccttatagagcttactgccgcggttagtgttcctggtgtaaagtgtgcagtcaaaact
ccaaacagggagatggttcctctcttctttgaagctatggaggctcttatcaagtga
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