Phragmites australis (common reed): 133912534
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Entry
133912534 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133912534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133912534
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133912534
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133912534
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
133912534
NCBI-ProteinID:
XP_062211306
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All DBs
Position
3:complement(18679336..18682721)
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AA seq
301 aa
AA seq
DB search
MASDAYIDDSCSEVIDPPKTEVLDVTELAGDHSHHSPKPNVVVSSSVRELLECPVCLGAM
YPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQNFGCLG
IYPYYSKLKHESQCQFRPYSCPYAGSECTVAGDIPYLVNHLKDDHKVDMHNGCTFNHRYV
KPNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDAEAKNYSYSLE
VGGTGRKMIWQGVPRSIRVSHRKVRDSYDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgatgcttatattgatgattcctgttctgaggttattgatcctccaaagact
gaggtactggatgttactgaactcgctggcgaccatagtcatcattcaccaaaaccgaat
gtggtggtatctagcagtgtacgcgaacttctggagtgtcctgtctgcttgggtgccatg
tatcctcctattcatcagtgctctaatggtcatacattgtgctcaggatgcaaaccaagg
gttcataatcgatgtccaacttgtaggcatgaactgggtaacataagatgccttgctctc
gagaaggtggctgcatctcttgaacttccatgcaagtaccagaactttgggtgcttaggc
atttatccttactacagcaagctgaagcacgagtcacaatgccaatttaggccttatagt
tgtccatatgccggatctgaatgcacagttgctggtgacattccatatttggtaaatcac
ttgaaagatgatcacaaagttgacatgcacaatggctgcaccttcaaccatcgttatgtc
aagccaaaccctcatgaagttgagaacgccacctggatgcttacggtgttcagttgcttt
ggccagtacttctgcctacatttcgaagcatttcagttgggcatggcacccgtctacatt
gccttcctgaggttcatgggggatgatgcggaagcgaagaactacagctacagcctggag
gtaggaggcacggggcgcaagatgatctggcagggggtgccacggagcatcagagtcagc
cacaggaaggtccgagatagctatgatgggctaatcatccagcggaacatggccttgttc
ttctcgggtggtgacaggaaggagctcaaactgcgggtcactgggaggatttggaaggag
cagtaa
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