Phragmites australis (common reed): 133912580
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Entry
133912580 CDS
T10575
Name
(RefSeq) novel plant SNARE 12-like
KO
K08494
novel plant SNARE
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133912580
Membrane trafficking [BR:
paua04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
133912580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
DUF5089
MCPsignal
Hydro_N_hd
Occludin_ELL
DUF5601
Mobilization_B
RGS_DHEX
DUF6988
Motif
Other DBs
NCBI-GeneID:
133912580
NCBI-ProteinID:
XP_062211381
LinkDB
All DBs
Position
3:complement(20148419..20153327)
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AA seq
275 aa
AA seq
DB search
MASDVPMSPELEQIDGEIHDIFRALQNGFQKMDKIKDSNRQAKQLEDLTGKMKECKRLIK
EFDRILKDDESKNPPETNKLLNDRKQFMIKELNSYVTLRKTYQSSLGNNNKRVELFDMGA
GSSEPAAEDNIQMASAMTNQQLIDTGRNQMDQTDQAIERSKMVVHQTVEVGTQTAAALTQ
QTEQMKRIGNELDSVHFSLKKASQLVKEIGRQVATDKCIMAFLFLIVLGVIAIIVVKIVH
PQNKNIRDIPGLAPPAQNFQINNRRLLWAEAFTGL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacgtgcccatgagcccggagctcgagcagatcgatggcgagatccacgac
atcttccgcgccctccaaaatggatttcaaaagatggacaagattaaagattctaatagg
caagctaaacaattggaagatctcacagggaaaatgaaggagtgcaagcgcttgatcaaa
gagtttgatcgcattctcaaagatgacgagtcaaagaatcctcccgagaccaacaagctg
ctaaatgacagaaaacagttcatgatcaaagagttaaattcctatgttaccttgaggaaa
acataccaaagtagccttggtaataataataagagggttgagctcttcgatatgggtgct
ggaagtagcgagcctgctgctgaggacaatattcaaatggcgtcagctatgacgaaccag
caactcattgatactggaaggaaccaaatggatcagactgatcaagctattgagcgttca
aaaatggtcgtacaccaaactgttgaggttggaactcagactgctgcagcattaacacag
caaacagagcaaatgaagagaattgggaatgagctagattctgttcacttttcgctaaag
aaagctagccaactagtgaaagagattggtcgtcaggttgcaactgacaaatgtattatg
gcatttctctttctgatagttttaggtgtgattgcaataatcgttgttaagattgtccat
ccacaaaacaaaaacattcgagacattccaggacttgccccgcctgctcaaaattttcaa
attaataacaggagattgttgtgggcagaagctttcacaggtctttga
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