Phragmites australis (common reed): 133912597
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Entry
133912597 CDS
T10575
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133912597
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133912597
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
133912597
NCBI-ProteinID:
XP_062211409
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All DBs
Position
3:20939660..20947176
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AA seq
470 aa
AA seq
DB search
MSSSGGGGQQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTKCGVGANRNQAF
VEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNRSPGETAGNVLLVTIEG
VQASDVTIEVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPSY
LLPEHVTSCFLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDASTLQSAVGADGRK
VEAEGNVLLASIENMQYAVTIDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVTTAAV
AKEALEGHCVYDGGYCKLHLSYSRHTDLNVKAHSDKSRDYTIPAGIIQGIPQPPGVPATS
SGWHGNPQAASAYASPGVAAQSHSTNGQVPNWNQGNSGYPPAPGAYPGQMCSSPVQYAAS
GGFPASPAAPPHGSHASQQMPQPHHVNQQLRPAGAPGMGQPPPPPPQYYR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtcaggcggcggagggcagcagttccgctacacgcagacgccgtccaaggtg
ctgcacctgcggaacctgccgtgggagtgcgcggaggaggagctcgtcgagctctgcaaa
cccttcggccgcatcgtcaacaccaagtgcggcgtcggcgccaaccgcaaccaggccttc
gtcgagttcaccgacgttaatcaagcaatctcaatggtttcatacttcgcatcatcttca
gaaccagcacaaatccgaggcaaaactgtttacattcagtattcaaataggcaagaaata
atcaacaacaggagccctggagagactgctggaaatgtgttgcttgttaccatagagggt
gttcaagctagtgatgtcactatagaagtgatccatatggttttttcggcttttggatat
gttcataaaatagccacttttgaaaaggctgctggttttcaggcattgatccagtacact
gatgcagccactgcttcagctgcgagagaggccttagacggaaggagcatcccaagttac
ttgcttccggaacatgtaacatcctgtttcttgcgaatttctttctctgcacacaaagat
ttgaacatcaagtttcagtcaaaccgcagcagagattacaacaatccttatcttccaatt
aattattctgccatggatgctagtacattacagtctgctgttggtgctgacggaaggaaa
gtggaggctgaaggcaacgttcttcttgcatcaattgagaatatgcaatatgctgttaca
attgatgttcttcataccgtgttctcatcatttggtactgtccagaaaattgctattttt
gagaagaacgggggaacacaagctttaattcagtaccctgatgtaactacagctgcagtt
gcaaaggaagcattggaagggcattgtgtctatgatggtggctactgtaagcttcacctg
tcatactctcgtcatactgatctgaatgtaaaggcacatagtgacaagagcagggattac
acaattccagcaggtataatccaagggataccgcaaccccctggtgtaccggcaacatcc
tctgggtggcacggtaatcctcaagcagccagtgcatatgcctcacctggcgttgctgct
caaagccacagtaccaatggacaagtgccaaattggaatcagggcaactcagggtatccc
ccagccccaggagcatatccaggccagatgtgctcatctccggtgcagtatgcagcatca
gggggcttccctgcctctcccgctgctccgccgcacgggtcccatgcttcgcagcagatg
cctcaacctcaccacgtaaatcaacagctcagacctgcaggtgcacctggaatgggccaa
ccaccaccaccaccaccgcaatactaccgttaa
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