Phragmites australis (common reed): 133912607
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Entry
133912607 CDS
T10575
Name
(RefSeq) formin-like protein 5
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
paua03015
mRNA surveillance pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133912607
09122 Translation
03013 Nucleocytoplasmic transport
133912607
03015 mRNA surveillance pathway
133912607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133912607
03041 Spliceosome [BR:
paua03041
]
133912607
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133912607
Spliceosome [BR:
paua03041
]
Complex C
Other components
EJC/TREX
133912607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
133912607
NCBI-ProteinID:
XP_062211424
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Position
3:complement(21091453..21096399)
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AA seq
726 aa
AA seq
DB search
MSSYPVLNNRPIDQWRVTDLKDELRKRRLPVKGLKDELVRRLFDSIQSEEPADEAAEDLG
ANVADDQLPEENVPQETTVTITEVSQETVVHVTQQVEVPLTEVNQGFTISAVGGVPSVDV
EASLSETATAKGEVLESIAGENSAFQELQPHAESNVEPVLEKTSEVHTNETIIVNDVIST
DVKSDLTPSEIKSDVTEASKIQKQDSASAPVDAFTSDADPMDTDVVAAAPISNDGEKSAP
NNDLGGNSSMYDEECKNSKLVNEDCKIILSKPNNQVPEVSPDLGSQIKCDSISSDDISTN
KKNNIEDNMNANNFDLELEVKPEMVKPSSGISSLGGDLQPLDDDNELVKNQSSLEDIDST
ANVGSYKKDSPEVGSPEKLNLDRSSGDESMDEDVMEVKQVESNMKSDDLMGKTELSSEDV
KEVTLPASVVEASSVDTKEVIAEEKPAASAEKRKLEAEETVASTEPIKRLRRWTADSGKV
PERQTLNQTGSDAPKDVFQPALKRSFGRSDSMASGDSPKERIVPPTQKPATTSLRIDRFV
RPFTLKAVQELLGKTGSVQTFWMDHIKTHCYVTFSSVDEAVATRNAVYNLQWPPNNGNHL
VAEFVDPQEVKLKVEPPPPPAAPISPAAASRTLPVQQAQANQSVPRQAVTPREQLPPPPP
LAKPPTSDPGSAKEMLPPTPKKPEPPVVTLDDLFKKTQSSPRIYYLPLSEEEVAAKLAAQ
GKGKKE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatatcctgtgctaaacaaccgaccgattgatcagtggagagttactgatctg
aaggatgaactccgtaagaggaggctccctgttaaaggtttgaaagatgaacttgtgagg
cgcctctttgactccattcagagtgaggaaccagctgacgaagctgctgaagatttgggg
gcgaatgtagctgatgatcagctgcctgaagaaaatgttcctcaggaaactacagttact
atcacagaagttagtcaggaaactgtggttcatgtgactcagcaagttgaagttcctctc
actgaagttaatcagggattcacgatttctgctgttggaggggtccccagtgttgatgtt
gaagcttccttaagtgagaccgcaacagccaaaggagaagtactggaatcaattgctgga
gaaaattcggcatttcaggaattacaaccgcatgcagaaagcaatgttgagcccgttctc
gagaagacctcagaggttcacaccaatgagacaatcattgtcaatgatgtgatcagtact
gatgtgaagtcggacctgaccccttctgaaatcaagtctgatgtcactgaagcaagcaaa
attcaaaaacaggattcagcatcagcacctgtggatgccttcacatcagatgctgatcct
atggatactgatgttgtcgctgctgcaccaataagcaatgatggagagaaatcggcacct
aacaatgatttgggtggcaattcttcaatgtatgatgaagagtgcaaaaattctaagctc
gtgaacgaggactgcaagatcatcctatcgaaaccaaataatcaggtacctgaggttagc
ccagatttagggtctcaaattaagtgtgactcgatttctagtgatgatatatcaactaac
aaaaagaataatatagaagataacatgaatgctaataattttgatttagaactagaggtt
aagccggagatggtcaaaccatcatctggcatttcttccttaggtggagatttgcagcca
ctggatgatgacaacgagctggttaagaaccagtcatctttggaagacatagattccaca
gctaatgtgggctcatacaagaaagatagtcctgaggttggttctccagagaaattaaat
ttagacaggagttcaggtgatgagtcaatggatgaggatgtcatggaggttaagcaagtt
gagtccaatatgaaatctgatgatctcatgggaaagactgagcttagttcagaagatgtg
aaagaggtgaccctccctgcttctgttgttgaggcttcctctgttgataccaaggaagtt
atagctgaagagaagccagcagcttcagcagaaaagaggaaacttgaagctgaagaaact
gttgcaagcactgaaccgatcaaacgactgcgccgatggactgcagacagtggcaaagtt
ccagagagacaaacattaaatcaaactggttctgatgctcctaaggatgtttttcaacct
gctttaaaacgttcttttgggaggtctgattcaatggctagtggagattctccgaaggag
cggattgtgccaccgacccagaaacctgcaacaacttccttgagaattgaccgatttgta
cgcccatttactctgaaagctgtgcaagagcttcttggtaaaactggatcagtgcagacc
ttctggatggatcatatcaagacccattgctatgttacattctcctcggtggatgaagct
gtggccactaggaatgctgtctacaacctacagtggcccccaaacaatgggaatcatttg
gttgctgaatttgttgatcctcaagaggtgaagctcaaggttgaaccccctcccccgcca
gcagctcctattagcccagctgctgcttcaaggacgcttcccgttcaacaagctcaggct
aatcaaagtgtgccgcgccaggctgttacaccaagggagcaattgccaccaccgccgccc
cttgctaagccccctacatctgatccagggtcagcaaaggagatgcttccacccactccc
aagaagccggaacctcctgttgtgacactggatgatctcttcaagaagacacaatcctct
cctaggatttactatctgcctttatccgaagaggaggtggcagccaagctcgccgcacag
ggcaaaggcaaaaaggaatag
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