KEGG   Phragmites australis (common reed): 133912607
Entry
133912607         CDS       T10575                                 
Name
(RefSeq) formin-like protein 5
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
paua  Phragmites australis (common reed)
Pathway
paua03013  Nucleocytoplasmic transport
paua03015  mRNA surveillance pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133912607
  09122 Translation
   03013 Nucleocytoplasmic transport
    133912607
   03015 mRNA surveillance pathway
    133912607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133912607
   03041 Spliceosome [BR:paua03041]
    133912607
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     133912607
Spliceosome [BR:paua03041]
 Complex C
  Other components
   EJC/TREX
    133912607
SSDB
Motif
Pfam: RSB_motif SAP
Other DBs
NCBI-GeneID: 133912607
NCBI-ProteinID: XP_062211424
LinkDB
Position
3:complement(21091453..21096399)
AA seq 726 aa
MSSYPVLNNRPIDQWRVTDLKDELRKRRLPVKGLKDELVRRLFDSIQSEEPADEAAEDLG
ANVADDQLPEENVPQETTVTITEVSQETVVHVTQQVEVPLTEVNQGFTISAVGGVPSVDV
EASLSETATAKGEVLESIAGENSAFQELQPHAESNVEPVLEKTSEVHTNETIIVNDVIST
DVKSDLTPSEIKSDVTEASKIQKQDSASAPVDAFTSDADPMDTDVVAAAPISNDGEKSAP
NNDLGGNSSMYDEECKNSKLVNEDCKIILSKPNNQVPEVSPDLGSQIKCDSISSDDISTN
KKNNIEDNMNANNFDLELEVKPEMVKPSSGISSLGGDLQPLDDDNELVKNQSSLEDIDST
ANVGSYKKDSPEVGSPEKLNLDRSSGDESMDEDVMEVKQVESNMKSDDLMGKTELSSEDV
KEVTLPASVVEASSVDTKEVIAEEKPAASAEKRKLEAEETVASTEPIKRLRRWTADSGKV
PERQTLNQTGSDAPKDVFQPALKRSFGRSDSMASGDSPKERIVPPTQKPATTSLRIDRFV
RPFTLKAVQELLGKTGSVQTFWMDHIKTHCYVTFSSVDEAVATRNAVYNLQWPPNNGNHL
VAEFVDPQEVKLKVEPPPPPAAPISPAAASRTLPVQQAQANQSVPRQAVTPREQLPPPPP
LAKPPTSDPGSAKEMLPPTPKKPEPPVVTLDDLFKKTQSSPRIYYLPLSEEEVAAKLAAQ
GKGKKE
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgtcatcatatcctgtgctaaacaaccgaccgattgatcagtggagagttactgatctg
aaggatgaactccgtaagaggaggctccctgttaaaggtttgaaagatgaacttgtgagg
cgcctctttgactccattcagagtgaggaaccagctgacgaagctgctgaagatttgggg
gcgaatgtagctgatgatcagctgcctgaagaaaatgttcctcaggaaactacagttact
atcacagaagttagtcaggaaactgtggttcatgtgactcagcaagttgaagttcctctc
actgaagttaatcagggattcacgatttctgctgttggaggggtccccagtgttgatgtt
gaagcttccttaagtgagaccgcaacagccaaaggagaagtactggaatcaattgctgga
gaaaattcggcatttcaggaattacaaccgcatgcagaaagcaatgttgagcccgttctc
gagaagacctcagaggttcacaccaatgagacaatcattgtcaatgatgtgatcagtact
gatgtgaagtcggacctgaccccttctgaaatcaagtctgatgtcactgaagcaagcaaa
attcaaaaacaggattcagcatcagcacctgtggatgccttcacatcagatgctgatcct
atggatactgatgttgtcgctgctgcaccaataagcaatgatggagagaaatcggcacct
aacaatgatttgggtggcaattcttcaatgtatgatgaagagtgcaaaaattctaagctc
gtgaacgaggactgcaagatcatcctatcgaaaccaaataatcaggtacctgaggttagc
ccagatttagggtctcaaattaagtgtgactcgatttctagtgatgatatatcaactaac
aaaaagaataatatagaagataacatgaatgctaataattttgatttagaactagaggtt
aagccggagatggtcaaaccatcatctggcatttcttccttaggtggagatttgcagcca
ctggatgatgacaacgagctggttaagaaccagtcatctttggaagacatagattccaca
gctaatgtgggctcatacaagaaagatagtcctgaggttggttctccagagaaattaaat
ttagacaggagttcaggtgatgagtcaatggatgaggatgtcatggaggttaagcaagtt
gagtccaatatgaaatctgatgatctcatgggaaagactgagcttagttcagaagatgtg
aaagaggtgaccctccctgcttctgttgttgaggcttcctctgttgataccaaggaagtt
atagctgaagagaagccagcagcttcagcagaaaagaggaaacttgaagctgaagaaact
gttgcaagcactgaaccgatcaaacgactgcgccgatggactgcagacagtggcaaagtt
ccagagagacaaacattaaatcaaactggttctgatgctcctaaggatgtttttcaacct
gctttaaaacgttcttttgggaggtctgattcaatggctagtggagattctccgaaggag
cggattgtgccaccgacccagaaacctgcaacaacttccttgagaattgaccgatttgta
cgcccatttactctgaaagctgtgcaagagcttcttggtaaaactggatcagtgcagacc
ttctggatggatcatatcaagacccattgctatgttacattctcctcggtggatgaagct
gtggccactaggaatgctgtctacaacctacagtggcccccaaacaatgggaatcatttg
gttgctgaatttgttgatcctcaagaggtgaagctcaaggttgaaccccctcccccgcca
gcagctcctattagcccagctgctgcttcaaggacgcttcccgttcaacaagctcaggct
aatcaaagtgtgccgcgccaggctgttacaccaagggagcaattgccaccaccgccgccc
cttgctaagccccctacatctgatccagggtcagcaaaggagatgcttccacccactccc
aagaagccggaacctcctgttgtgacactggatgatctcttcaagaagacacaatcctct
cctaggatttactatctgcctttatccgaagaggaggtggcagccaagctcgccgcacag
ggcaaaggcaaaaaggaatag

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