Phragmites australis (common reed): 133912658
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Entry
133912658 CDS
T10575
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133912658
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133912658
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133912658
04121 Ubiquitin system [BR:
paua04121
]
133912658
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133912658
Peptidases and inhibitors [BR:
paua01002
]
Metallo peptidases
Family M67
133912658
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Others
Others
133912658
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
133912658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
IcmF-related_N
Motif
Other DBs
NCBI-GeneID:
133912658
NCBI-ProteinID:
XP_062211496
LinkDB
All DBs
Position
1:complement(21295530..21302041)
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AA seq
515 aa
AA seq
DB search
MSTGPPRQPRRDVSIEALARPVDVDHRISIPYYFRIADNLLIQANVYREEKNLLDLYIIL
LRYSSLLCETIPKHHDYNAFKSREKEFLKKGPHNSDKLFSVINELESLKPVVQQEIANLN
SNVGAEEPNGVHGTYATSSSKEQHIPSPYTSKSLSGSPNELLQKSFSGLKHQAAPLHNVQ
PNRRQQKSYSSLPYPKEETLSRHSILGPNGLHGQWTGPITGIRIEYPSNPELTQSDISSL
VPAILNQDGLHGPRTASQDKNDDMQSVLSLDDGRWSLPVEEPASVSPGLEAEFSQLNIRQ
PSPPPVLAQVHPERGPIPPSRVTDPRPGLATSDIGRYQSLHVPVALMECFLRVAEANTAK
NLETCGILAGTLKKRTFYVTTLIIPKQKSTSDSCQATNEEEIFEVQDKGSLLSLGWIHTH
PTQTCFLSSIDLHNHYAYQVMLPEAIAIVMAPTDTRKHGIFHLTDPCGMGVIHDCHETGF
HPHEEPLDGTPIYEHCSHVYMNPNVKFEMVDLREA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgggaccacctcggcagcctaggagagacgtaagcatcgaggccttggcgcgg
ccagtcgacgtcgaccaccgcatcagcatcccctactacttccgcatcgccgacaacctc
ctcatccaggctaatgtgtatcgagaggagaagaaccttctggacctttatataatcctc
ctgagatactcgagcttgctgtgtgagacgataccaaagcatcacgactacaatgcattt
aagtcaagggaaaaggaatttctgaagaaaggcccgcacaactctgataaacttttcagt
gttatcaatgagctagagtccctgaagccagttgtgcagcaagaaatcgccaaccttaat
agcaatgtgggtgcagaggaacctaatggtgtacatggaacctatgctacaagtagtagc
aaggagcagcatatcccaagcccatatacgtcaaagtcattgtctggaagccccaatgaa
ctattgcagaaatcgttctctggtttgaagcatcaagcagcaccattgcataatgttcaa
cctaataggcggcaacagaaatcatattccagcttgccttatccaaaagaggaaacactt
tccagacactcgatactagggcctaatgggcttcatggacaatggacagggcctattact
ggtatcaggattgagtatccaagtaatcctgaattaacccaaagtgatatctctagttta
gtgccagcaatcttgaaccaagacggcttgcatggtcccagaacagcatcgcaggataaa
aatgatgatatgcagtctgttctctcgcttgatgatggcagatggtctttaccagtagaa
gaaccagcctcagtgtctcctgggttggaagcagagttttcccagctgaatattagacag
ccttctcccccacctgtcctagcacaagtgcatcctgagcgtggaccaattcctccatca
agagttactgacccaaggccaggacttgctacctcggacatcggacgatatcagagtttg
catgtgccggtggcattaatggagtgtttcctgagggttgctgaggcaaataccgcaaaa
aatttggaaacatgtggaattctcgctggtactctgaaaaagagaactttttatgtgacc
acattgataattcctaagcagaaatcaacatctgattcatgtcaagctacgaacgaagaa
gaaatatttgaagttcaggacaagggttcacttttatcacttggttggattcatacacat
ccaacgcagacctgcttcctatcttctattgatcttcataatcattatgcgtatcaggtc
atgctacctgaagcaattgcaatagttatggcaccaactgatacaagaaaacacggcata
tttcatctcacggatccatgcggcatgggtgtgatccacgattgtcatgagaccggattc
catcctcatgaggaaccactagatgggacgccaatttacgagcattgctcccatgtatac
atgaaccccaatgtgaagtttgagatggtcgacctacgtgaagcgtga
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