Phragmites australis (common reed): 133913037
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Entry
133913037 CDS
T10575
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
paua04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133913037
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133913037
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133913037
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133913037
03036 Chromosome and associated proteins [BR:
paua03036
]
133913037
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133913037
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133913037
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133913037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
133913037
NCBI-ProteinID:
XP_062212049
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All DBs
Position
3:complement(39728633..39737109)
Genome browser
AA seq
532 aa
AA seq
DB search
MFNKIIKRGARKGARGDGAEPAPRPVAPSSSSGGGGGAGGSAPVTVNHASRASVPSPSSP
TSPHVAPAAFPANPVSSHPSPPLLEPLPLLRDVAAADRPGLLLRKLRLVAALFDFSDSLK
HPREKEAKRQALLELVDYVQAPAQAAGTNAPARLPDHVQEALIAAISANIFRPLPPALHE
SAAAIDPGAAPDEEEEPYLDPAWPHLQLVYELLLRYVVSSDTDTKVAKRYVDHAFVLRLL
DLLDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNVFYRFIFETQRHNGIGELLEIL
GSIINGFALPMKEEHKLFLARVLIPLHKPKSVGIYHQQLSYCIVQFVEKDYKLADTVIRG
LLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNSFHFQRRHIGVA
IFWLSPRRRHGASGYGVCSSCRPYAPRHCPCAPRRPPSPLLSSSSAVAPALLVVRHRPCA
PHRPPLSLRSAPSPLRSAPSAVAQRDPYYATPASLLGLPLRSPLRPAPTTEE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcattaagcggggtgcccgcaagggcgcgcgcggggacggggcggag
cccgccccgcgccccgtggcaccctcgtcgtcctccggtggcggaggcggcgcggggggc
tccgctcctgtcaccgtcaaccacgcctcccgggcctccgtgccgtcgccgtcctcgccg
acctcgccgcacgtggcgccggccgcgtttcctgcgaacccggtgtcgtcgcacccctcg
ccgccgcttctcgagccgctcccgctccttcgtgacgtcgccgccgccgaccgcccgggt
ctcctcctccgaaagctccgcctcgtcgccgcgctcttcgacttctccgactcgctcaag
cacccgcgggagaaggaggccaagcgccaggcgctcctcgagctcgtcgactacgtgcag
gcccccgcgcaggccgcgggaaccaacgcgcccgcgcgccttccggaccacgtccaggag
gcgctcatcgccgctatctccgccaacattttccgcccactgcccccggcgctgcacgag
tccgccgccgcgatcgaccctggtgccgcgcccgacgaggaggaggagccctacctcgac
cccgcctggccgcaccttcagctcgtctatgagctcctgctccggtacgtggtgtcgtcg
gacaccgacaccaaggttgccaagcggtacgtggaccacgccttcgtgctccgcctcctt
gaccttttggactctgaggatccccgcgagcgcgagtacctcaagaccgtgctccaccgc
atatatggcaagttcatggtacaccgccccttcatccgcaaggccatcaacaatgtgttc
tatcggttcatcttcgagacgcagcgccacaatggcataggggagctccttgagatcctt
ggaagcatcattaacggcttcgccttgccaatgaaggaggagcacaagcttttccttgcc
cgtgtgctcatcccattgcataagcccaagtctgtcgggatctaccaccagcaactgtca
tattgcattgtccagtttgttgagaaggactacaaactagcagatacagtgatcagaggg
ctgctcaaatactggccggtcacaaattgccagaaggaggtgctgtttctgggggagctt
gaggaagtgctcgaggcgacacagcctgccgagttccagcggtgcatggttccgctgttt
aagcagattgggcgctgccttaacagttttcatttccagcgacgccatatcggcgtggcg
attttctggctctcaccacgccgccgccacggcgctagcgggtatggcgtctgcagcagc
tgccgcccctacgctcctcgccattgcccatgcgctcctcgtcgtccgccgtcgcccctg
ctctcctcgtcgtccgccgtcgcccctgctctcctcgtcgtccgccatcgcccctgcgct
cctcaccgtccgccgttatccctgcggtctgcgccgtcacccctgcggtctgcgccgtct
gccgtcgctcagcgagatccctactatgctactccggctagcctcttaggcctgccactc
cgctcgcctctccgcccggcgcccactactgaggagtga
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