Phragmites australis (common reed): 133913097
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Entry
133913097 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133913097
KO
K20222
importin-5
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133913097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133913097
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133913097
Pre-60S particles
133913097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
HEAT
Importin_rep_6
TOR1L1_N
HEAT_2
HEAT_EF3_N
MMS19_C
Vac14_Fab1_bd
Cnd1
Htt_N-HEAT_1
Adaptin_N
Arm
TPR_TNPO3_IPO13_3rd
ARM_ARMC5
mTOR_dom
HEAT_Maestro
DNA_alkylation
RTP1_C1
ARM_ECM29_C
Phasin_2
Motif
Other DBs
NCBI-GeneID:
133913097
NCBI-ProteinID:
XP_062212132
LinkDB
All DBs
Position
3:40890985..40899902
Genome browser
AA seq
1110 aa
AA seq
DB search
MDPRAEADAAAVLGADPAALTALLADLTSPANEARSRAERQFHFLRGSHPDALALSLAHL
LLSPAHPSAPIAAVLLRRLIAPSSQSFCYPALSPASQSSLRALLLSAASAPALPRSISKK
LSDAVAELASFLLPANAWPDLLTFMYKSIASPSSPPALQESALNILARLASHLAAGFPNL
HGLLLSALSHPSSADVRVAGLNAAIRLIQSLPSAADRDQFQDLLPAMMRALAESLNCGNE
GSAQEALEMMIELAGAEPRFLRRQLPDVVASMLQIAEAPGLEDGTRHLAVEFVVTLAEAR
DRAPGMMRKLPRYVGRLFAVLMTMLLDVQDEPAWHAAVSEEEDAGETGSYVFAQECLDRL
AIAVGGNTILPVAAELLPSFFASEEWKRRHAALVTIAQIAEGSAKVMIKNLEQVVGMVLN
SFQDPHPRVRWAAINAVGQLSTDLGPELQNQLHHVVLPALASAMDDSQNPRVQAHAASAI
LNFSENCRPDILTPYLDGIVGKLLLLLQTGNQMVQEAALTALASAADSSQEHFQKYYDAV
MPYLKAILMNATDKSNRMLRAKSMECISLVGMAVGKQKFKDDAKQVMEVLMTLQGSQMEA
DDPITSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVSVTSAGTDENGESDDE
GVETITLGDKRIGIRTSLLEEKATACNMLCCYADELKEGFSPWIDQVATTLVPLLKFYFH
EEVRKAAVLAMPELLRSATLAIEKGQAQGRDKSYLKQLSDYIVPALVEAMHKEPEPQICA
SILESLNESIQLSGTLLEEGQVRSIVDGIKDAIIASTNRRIERTERAKAEDFDSEEEELL
REENEQEDEIFDQVGDCLGTLVKTFKTYFLPFFDELSVYLTPMLSKDKTAEERRIAICIF
DDVAEHCREAAVRYYGTYLPSLLEACASENPDVRQAAVYGIGICAEFGGSAFRSHTGEAL
SRLYNVIRHPNALDLDNAMAYDNAVSALGKICQFHRDSIDASQVIPAWLSCLPIKNDLIE
AKLVHEHLCAMLEKSERELLGHNNQYLPKIVSVFAEILCAGKDLATEQTASRMINLLRQL
QTTLPPSVLASTWSSLQPQQQLALQSVLSS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgggcggaggcggacgcggcggcggtgctgggcgcggacccggcggcgctg
acggcgctgctcgcggacctgacctcccctgccaacgaggcgcggtcgcgggcggagcgg
cagttccacttcctccgcgggtcccacccggacgcgctcgcgctcagcctcgcgcacctg
ctgctctccccggcgcacccctccgcgcccatcgccgccgtgctgctgcgccgcctcatc
gccccgtcgtcccagtccttctgctaccccgcgctgtccccagcctcgcagtcctcgctc
cgcgcgctgctcctctccgccgcctctgcgcccgcgctccccaggtccatctcgaagaag
ctctccgacgccgtcgctgagctcgcctccttcctcctgcccgctaacgcgtggcccgac
ctcctcaccttcatgtacaagtccatcgcctccccgtcctcccctccggcgctgcaggag
tcggcgctcaacatcctggcccggctggcctcccacctcgccgctggcttccccaacctt
cacgggctcctcctctccgcgctttcccacccctcgtccgccgacgtccgcgtcgcgggg
ctcaacgccgccatcagactcatccaatccctcccctctgccgccgaccgcgaccagttc
caggacctcctcccggccatgatgcgcgccctcgccgagtcgctcaactgcgggaacgag
ggctcagcgcaggaggccctggagatgatgatcgagctcgccggcgcagagccccggttc
ctgcgccgccagctgccagacgtggtcgcctccatgctgcagatcgccgaggcccccgga
ctagaggacggcacccgccaccttgccgttgaatttgttgttacactcgcggaggcacgg
gaccgcgcgcccgggatgatgcggaagctgccgcggtacgttgggcggctctttgcagtg
ctcatgactatgctgctcgatgtccaggatgaaccggcgtggcatgccgcagtgtcagag
gaggaagacgctggggagactggaagctatgtcttcgcgcaggagtgtcttgaccggctg
gcaattgctgttggtgggaacacgattttgcctgtggcagctgagttgcttccgtcgttt
ttcgcttctgaagagtggaagagacggcatgcggcattggtgacgattgcgcagattgca
gagggctctgctaaggtgatgattaagaatctggagcaggtggttgggatggtgctaaat
tcgtttcaggatcctcatcctcgggtgaggtgggcggcaataaatgcagtagggcagctt
tcaacggacctgggacctgagttgcagaatcagttgcaccatgtcgtgctacctgcattg
gcttcagcaatggatgattcccagaacccacgcgtacaggcacacgccgcttccgcgatt
ctaaacttcagtgaaaactgtagacctgatattttgacaccatacttggatggaatagtt
gggaagcttctactgttgcttcagactggaaaccaaatggtgcaagaggctgctttaact
gctttagcatcggctgcggattcttctcaggaacatttccaaaaatattatgatgcagtc
atgccatacctcaaggccattctcatgaatgcaactgataaatccaacagaatgttgcgt
gccaaatccatggaatgcatcagtttagttggtatggcggttgggaaacaaaagtttaag
gacgatgctaagcaggtgatggaagttctgatgacactgcaaggatctcagatggaggct
gatgaccctataacaagttacatgctgcaagcatgggcaagactgtgtaaatgccttggt
caggatttcttaccatacatgagtgttgttatgccccctctgctccagtctgctcagctt
aaaccagatgtgagtgtcacttctgctgggacagatgaaaatggtgaatctgatgatgag
ggtgtcgagactattacactgggtgataagaggataggcatccggactagtctactggaa
gagaaagctacagcatgtaatatgctgtgttgctatgctgatgagctcaaggaaggattt
tccccatggattgatcaggttgcaactacactcgtacctctcctcaagttctattttcat
gaagaagttaggaaggcagctgtcttggctatgcccgagcttctacgttcagcaacgttg
gctatagaaaagggtcaagctcaaggccgagataaatcttatcttaagcaactgtctgat
tacatagttccagctcttgtagaggccatgcataaagaacctgagccacaaatttgcgca
agcatactggagtcattgaatgagtccatacagttatcaggaacacttcttgaggaaggt
caagtcagatccatagtggatggaatcaaagatgcaataatagcgagcactaataggagg
atagaacgaaccgagagggcaaaggctgaagatttcgattctgaagaagaggaactactc
agagaagaaaatgaacaggaggatgaaatctttgaccaagttggtgattgtctgggcact
cttgtcaaaaccttcaagacttatttccttccgttctttgatgaactctccgtgtatttg
acacctatgttgagcaaggataaaacagcagaagaaagaaggatcgccatatgcattttt
gatgatgttgcagagcactgccgcgaagcagcagttagatattatggcacatatcttcct
tcgttgttagaagcctgcgcaagtgaaaatccagatgtcaggcaggctgcagtttatgga
attggcatttgtgctgagtttggtggttcagcatttagatctcacactggggaggcccta
tccagattatacaatgtaataagacatcctaatgctttggatttggacaatgcgatggca
tacgacaatgctgtttctgctctcggaaaaatatgtcaatttcatcgtgatagcattgat
gcatcacaggtcattcctgcttggttaagttgtctaccaataaaaaatgacttaattgag
gccaagcttgtccatgaacacctgtgtgcaatgcttgagaagtccgagagggagcttttg
ggtcataacaatcagtatcttccaaagattgtctctgttttcgcagagatattatgtgcg
ggcaaggatctggcaacagaacagaccgctagcaggatgattaatctgctaaggcagctt
cagacaacattgcctccttcggtattagcctcgacatggtcctctttgcaaccacagcaa
cagcttgctctacagtctgtgctatcgtcatag
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