Phragmites australis (common reed): 133913108
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Entry
133913108 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133913108
KO
K13114
pinin
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
paua03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133913108
Spliceosome [BR:
paua03041
]
Complex C
Other components
EJC/TREX
133913108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133913108
NCBI-ProteinID:
XP_062212145
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Position
3:complement(40984303..40989150)
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AA seq
407 aa
AA seq
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MAAATEKTAEDIRRELQELQRQHREITERLRDPRGLRRGAAGPVPVGPRPLRGFARPASE
SGDQPEPKRRLLSAVVKVDGAEANEEGAKDAETEGREEGPGAAEGGDRRGITNGGFRRDG
SQRLLRRVDYNSLPEPAPRELPKNEDPNLVRRNKRMLGQLLVGTLEKFQQEDKKLSSSEA
YLRRSETQRKAEQKVREESERLRQQEREQIAEKRKRDMTLRARVAAKAEEKRLELLYIQW
TEHHKKLSNFLRTKAEPPIYYMPTKPIIDDPAIVEQNKEKVFEEWKSERRAELTQFQKQV
EEQYLSNVERQLERIQNARNARRGNGPANMQEMDKELDTHRAEHGLKTRRIPEEGGNDDD
EDAEDMAAEDELMDEVLDVNDAINDDPTKPPEEAATDGGEPAPEEAQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgacggagaagactgcggaagatatccgccgcgagctccaggagctccag
cgtcagcaccgcgagatcaccgagcgcctgcgcgacccccgcggccttcggcgcggcgcc
gctggccccgtccccgtcgggccccgcccgctccgcggcttcgcgagacccgcttcggaa
tcaggagaccagcctgagccgaagcggcggctgctatcggctgtcgttaaggtggatggc
gctgaagctaacgaggaaggcgcaaaggatgcagagacggaggggcgtgaggagggtcca
ggtgccgctgaaggcggtgacaggaggggtatcaccaatggcgggttcaggagggatggg
agccagcggttgctgaggagggtggactataattcgctgcctgagcctgccccaagggag
cttcccaaaaatgaggacccgaacttggtgaggaggaataagaggatgctggggcagctt
cttgtcggtacattagagaaatttcagcaagaggacaaaaaactttccagctccgaggct
tatctgcgcagatcggagactcagcgaaaggctgagcaaaaggttcgtgaggaaagcgaa
aggttgcgacagcaagagcgagagcaaattgcagagaagcgtaagcgtgacatgacgctt
cgcgctcgtgtagctgctaaggcagaagaaaagaggttggagctgttgtacattcagtgg
actgagcatcataaaaagctgtccaatttcctaaggacaaaagctgaaccgcctatttac
tacatgccaactaaaccaattattgatgatccggctattgtcgagcagaacaaggaaaag
gtatttgaagaatggaaatctgagcgcagggctgagctgactcaatttcagaagcaagtt
gaggagcaatatctctccaatgttgagaggcagctggaaaggatccagaatgcccggaac
gcacgaagggggaacgggcctgcaaacatgcaagaaatggataaggagctggacacgcac
agggcagagcatggtctgaagactcggcggattcctgaggagggtggcaatgatgatgat
gaggatgcggaggacatggccgcagaagacgagctgatggatgaagtcttggatgtcaac
gatgcgatcaatgatgacccaaccaagccacctgaggaagctgctactgatggtggcgag
cctgcacctgaggaggcacaatag
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