KEGG   Phragmites australis (common reed): 133913205
Entry
133913205         CDS       T10575                                 
Name
(RefSeq) tubulin alpha-1 chain
  KO
K07374  tubulin alpha
Organism
paua  Phragmites australis (common reed)
Pathway
paua04145  Phagosome
paua04517  IgSF CAM signaling
paua04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:paua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133913205
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    133913205
  09142 Cell motility
   04814 Motor proteins
    133913205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133913205
   03036 Chromosome and associated proteins [BR:paua03036]
    133913205
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:paua04812]
    133913205
   04147 Exosome [BR:paua04147]
    133913205
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133913205
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     133913205
Cytoskeleton proteins [BR:paua04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    133913205
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133913205
  Exosomal proteins of other body fluids (saliva and urine)
   133913205
  Exosomal proteins of colorectal cancer cells
   133913205
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281 DUF8666
Other DBs
NCBI-GeneID: 133913205
NCBI-ProteinID: XP_062212262
LinkDB
Position
3:42990088..42993117
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEFDEGEEGDEGDEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggagtgcatctctatccacatcggccaggctggtatccaggtcggaaacgcgtgc
tgggagctttactgcctcgagcatggcattcaggctgatggtcagatgcccggtgacaag
accgttggaggaggtgatgatgctttcaacaccttcttcagtgagactggcgcagggaag
catgtcccccgtgctgtgttcgttgaccttgaacccactgtgattgatgaggtgaggacc
ggcacctaccgccagctcttccaccctgagcagctcatcagtggcaaggaggatgctgcc
aacaactttgcccgtggtcactacaccattggcaaggagattgttgatttgtgccttgac
cgcatcaggaagcttgccgataactgcactggtctccagggcttcctcgtcttcaacgct
gttggtggaggaacgggctctggccttggttctctcctccttgagcggctgtctgttgac
tacggcaagaagtccaagctcgggttcactgtgtacccatctccccaggtctccacctcg
gtggttgagccatacaacagtgtcctgtccacccactccctcctcgagcacactgatgtc
gctgtcctgcttgacaacgaggccatctacgacatctgccgccgctcccttgacattgag
cgcccaacctacaccaacctcaacaggcttgtgtctcaggtcatttcatctctgactgcc
tccctgaggttcgatggtgctctgaacgttgatgtgaacgagttccagaccaatcttgtg
ccctacccgaggatccacttcatgctttcgtcctacgctccagtgatctccgctgagaag
gcctaccacgagcagctctccgtggctgagatcaccaacagcgccttcgagccttcctcc
atgatggccaagtgcgacccccgccacggcaagtacatggcctgctgcctcatgtaccgt
ggtgacgtggtccccaaggacgtgaacgcggctgtcgccaccatcaagactaagcgcacc
atccagttcgtggactggtgcccgaccggcttcaagtgcggcatcaactaccagccaccc
agcgtggtccccggcggggacctcgccaaggtgcagagggccgtgtgcatgatctccaat
tccaccagcgtcgtggaggtgttctcccgcatcgaccacaagttcgacctcatgtacgcc
aagcgcgccttcgtgcactggtacgtgggcgagggcatggaggagggcgagttctccgag
gcccgtgaggacctggctgcgctcgagaaggactacgaggaggtcggcgctgagttcgac
gagggcgaggaaggcgatgagggtgatgagtactag

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