Phragmites australis (common reed): 133913216
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Entry
133913216 CDS
T10575
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
paua Phragmites australis (common reed)
Brite
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133913216
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Helicases
133913216
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NCBI-GeneID:
133913216
NCBI-ProteinID:
XP_062212275
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Position
3:43283070..43292205
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AA seq
642 aa
AA seq
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MPRVKPAPVMEEEAEEARQEVVGAGGAGGILDDGATDGAEGSPDDGAAGGKKVKEEEEEE
EKDVTFDELGLDEQLKRALRKKGMTNATPIQREAIPLILEGKDVIAKAKTGSGKTFSYLL
PLLHELLKLSSEGRIRKPAPNAFILVPTRELCQQVFNVASSLLEFCTSKLKVVQVTASMS
DKDITVALSGPPNILVSTPACVAACISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDL
KALIPHIPRSCQTIMMSATSSSDVEKLTKLLLHNPFILTLTEVGRAKDDVIPRNVQQFWI
SCSAKDKMLHILALLKLELIQKKVLIFVNSIDMAFRLRLFLEKFGIRSAVLNAELPQNSR
LHIIEAFNARLFDYLIATDDNKPKEEKQINKENKKESRVSRKHLQQTLDAEFGVVRGIDF
NNVFTVVNFDMPPNPAGYVHRVGRTGRANKTGASISLVSPEENSTFEEIVHLLQDVEKKD
TNCISPFPLLTKDAVESLRYRAQDVARGVTSRDIQEARRQDIKNEILNSEKLKSHFEENP
RDLDLLKHDKLLSNKAIPAHLRDVPEYLIDPKTKEASNVVKLNRAAMGIDKPQRRRRQVF
KGGSGKSRDPLKTFSAEGKSRRRGRKDKEGGEPDRRKRKVES
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgttaagcctgcccctgtgatggaggaggaggcggaggaggcaaggcaggaa
gttgtgggcgccggtggggcgggcggaatcctggacgatggagccactgacggggcggaa
ggcagcccggacgatggagccgccggcgggaagaaggtgaaggaggaggaagaggaggaa
gagaaggatgtgaccttcgatgagctgggcctggacgagcagctgaagagggctttgagg
aagaagggcatgaccaacgccacccctatccagcgggaggccatcccgctcatactggaa
ggaaaggatgtaatcgcaaaggccaagactggctctggaaagaccttttcctaccttcta
ccactgctgcacgagctattgaagttgtcctcggaagggcgtattcgaaaacctgcacca
aatgccttcatcctggtgccaactcgagagttatgtcagcaggtttttaatgtggcatca
tctctccttgagttctgcacatccaaattgaaggttgtgcaagtgactgcgagcatgtcg
gataaggatattactgttgcattgtctggaccccctaatattcttgtgtcaactccagct
tgcgttgcagcatgcatatcaaagggcattatccgtggatcatctattaaagagtcactt
tcaatgatgattctcgatgaggctgacctccttctatcctatcgctgtgaagatgacttg
aaagctctcatcccacatatcccaagaagctgtcaaaccattatgatgtctgcaacttca
agctctgatgtcgagaaattgacgaagctacttctgcacaacccatttattctaactctt
acagaggttggtcgtgcaaaggatgatgtgattcctagaaatgttcaacagttctggatc
tcatgtagtgctaaggataaaatgcttcatatccttgcactcttaaagttagagcttatt
cagaagaaagttcttatatttgtcaactccattgatatggcattcagattgcgactgttc
cttgaaaagtttggaataagatctgcggtgttgaatgcagagttgccacaaaattctcga
ctacatattattgaggcattcaatgctaggctatttgattatctgatagcaacggatgac
aataaaccaaaggaggagaagcaaatcaataaggaaaacaagaaagagtcaagggtatca
cgcaaacatttgcagcagactctagatgccgaatttggagttgtcagaggaattgacttc
aacaatgtattcacagtagttaattttgacatgcctccaaatcctgctggctatgttcac
agagtaggacgaacagggagagcaaataagactggtgcatccatatcgcttgtttcgcca
gaggagaatagtacttttgaagagattgtgcatctgttgcaagatgttgaaaagaaagat
acgaactgcatttcacctttcccattacttacaaaagatgccgttgagtctctgcgatat
agggctcaggatgttgcgaggggtgtgacaagccgtgatatacaggaagcacgtcgccag
gacataaagaacgaaattctcaattccgagaagttgaagtctcattttgaagagaacccg
agagaccttgatttgctcaaacacgacaaactactaagcaacaaagcaattcctgcacat
ctgcgtgatgtccctgagtacctaattgatcccaaaaccaaagaagccagtaatgttgtc
aaacttaacagggctgctatgggtattgacaagccccaaaggcggagaagacaggtattc
aaggggggatcaggcaaaagtagagatccacttaagactttctctgctgagggaaaatca
cggagacgagggaggaaagataaagagggtggtgaaccagatagaagaaagaggaaggtg
gaaagctaa
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