Phragmites australis (common reed): 133913289
Help
Entry
133913289 CDS
T10575
Name
(RefSeq) heat stress transcription factor A-2a-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133913289
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133913289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
TelA
CC_Bre1
DUF6212
OB_RRP5_4th
DUF4763
Motif
Other DBs
NCBI-GeneID:
133913289
NCBI-ProteinID:
XP_062212380
LinkDB
All DBs
Position
3:complement(44283897..44285914)
Genome browser
AA seq
369 aa
AA seq
DB search
MDPFHGIVKEEEFDFDFAGASAEGAPAASLSSWAAGLPEVPRPMEGLGEAGPPPFLTKTY
DVLDDPNTDTIVSWGFAGNSFVVWDANAFATVILPRYFKHSNFSSFVRQLNTYGFRKVDP
DRWEYANEGFLRGQRELLKTMKRRRPTSSPSAQQGQAPPACLEVGQFGREGEVHRLQRDK
GILLTEVVKLRQEQQATREQMQAMEERITAAEQKQQQMTVFLARTLRNPGFLLMLVDRKG
LGGRRRELKDALSKKRCRPIEYLSRDGESSSSAAGSATSGHYVPGISVVVDGVSEADDDE
SRREESVGGGGEDTESFWVELLSLGLEEKHREGGGGEEEGSSADVDDDVDVLVQSMYHHN
PNPSSPSPK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatccgttccatggcattgtgaaagaggaggagttcgacttcgacttcgccggcgcg
tcggcggagggcgcgccggcggcgtcgttgtcttcgtgggccgccggcttgccggaggtg
ccccggccgatggagggcctcggcgaggccggcccgccgccgttcctgaccaagacctac
gacgtcctggacgaccccaacaccgacaccatcgtctcctggggattcgccgggaacagc
ttcgtcgtctgggatgccaacgccttcgccacggtgatcctcccgcgctacttcaagcac
agcaacttttccagtttcgtccggcagctcaacacctacgggttcaggaaagttgacccg
gacaggtgggagtacgcgaacgaggggttcctgcggggccagagggagctcctcaagacg
atgaagcgccgccggccgacgtcaagcccgtcggcgcagcaggggcaggcgccgccggcg
tgcctggaggtgggccagttcgggcgcgagggcgaggtgcaccggctgcagcgcgacaag
gggatcctgctcacggaggtggtgaagctgcggcaggagcaacaggcgacgcgcgagcag
atgcaggccatggaggagcgcatcacggccgcggaacagaagcagcagcagatgacggtg
ttcttggcacgcacgctgaggaacccgggcttcctcctgatgctcgtcgaccggaagggc
ctgggcggtcgccggagggagctcaaggacgcgctctccaagaagcgctgccgccccatc
gagtacctctcccgcgacggtgagagcagcagcagcgccgcggggtcggcgacgtcgggc
cactatgttcccggcatttcggtcgtcgtggacggcgtgtcggaggcggacgacgacgag
agccggcgcgaggagagcgtcggcggcggaggcgaggacacggagagcttctgggtggag
ctgctcagccttggcctggaggagaagcacagggagggcggtggcggcgaggaggagggg
agcagcgctgacgtggacgacgacgtggacgtgctcgtgcagagcatgtaccaccacaac
cccaacccgagcagccccagtcccaagtga
DBGET
integrated database retrieval system
