Phragmites australis (common reed): 133913382
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Entry
133913382 CDS
T10575
Name
(RefSeq) upstream activation factor subunit spp27-like
KO
K15223
upstream activation factor subunit UAF30
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133913382
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
133913382
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Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
SRP54_N
CDC45
Prothymosin
DUF1631
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
133913382
NCBI-ProteinID:
XP_062212501
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Position
3:45576266..45582348
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AA seq
332 aa
AA seq
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MVSDSELVERLREVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFLAEVAA
KAEPAEPEEAAVPKEEEPEPEEETEGGEGEEEEDGEGGEEEDEEEEDEDGDGGGGGDRKK
RRMDKDNDGKRRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRQNNLQDQSNKR
KILPDERLRKIFNVNSIDMFQMNKALTKHIWPLNSEGPVSPDRSTPKEKPQKRDRSEGKK
QKGGSSGSGSGLLAPLQLSDDLVKFIGTGESMLSRSDVVKRMWGYIKENNLQDPSDRRKI
ICDEKLKDLLQVESFNGFTVSKLLAPHFTKTK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggactcggagctggtggagcggctgcgggaggtgctgcggtcgtcggacctc
aacaccacgaccaccgccgccctgcgccgccgcctcgaggaggacttcggcgccgacctc
tcccacaagaaggccttcatccgggagcaggtcgacctcttcctcgccgaggtcgccgcc
aaggccgagccggcggagcccgaggaggcggcggtgcccaaggaggaggagcctgagccg
gaggaggagacggaggggggcgagggggaagaggaggaggatggcgaagggggagaggaa
gaagacgaggaggaggaagacgaggatggggatggcggcggcggcggcgaccggaagaag
cggcgaatggataaagataatgacgggaagagaaggggtggtggctttacgaaattatgc
agtctttccccggcacttcaagagtttgttggcgcctctgagttagctaggacagaggtg
gtcaagaagctttgggcatatattcgacaaaataatctacaagaccaaagcaataagagg
aagattctacccgatgagagattgaggaagatcttcaatgtcaattccatcgatatgttc
caaatgaataaagctttgaccaaacatatttggccattgaattctgagggtcctgtctct
cctgacagatcaacgcccaaagagaagccgcaaaagagagacaggagtgaaggaaagaag
caaaagggtggctcttcggggtctggatctggtcttcttgcgccccttcaactttcggat
gatttagtgaaatttatcggcactggtgagagtatgctatcacgatcagatgtcgtgaag
agaatgtggggttacataaaagagaacaacttgcaggatccttctgatcggaggaaaata
atctgcgatgagaagctgaaggatctattgcaagttgaatcattcaacggcttcacagtt
tcgaagctgcttgccccccattttaccaagacgaagtag
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