Phragmites australis (common reed): 133913389
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Entry
133913389 CDS
T10575
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133913389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133913389
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133913389
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
His_kinase
Motif
Other DBs
NCBI-GeneID:
133913389
NCBI-ProteinID:
XP_062212512
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Position
3:complement(45671438..45676520)
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AA seq
545 aa
AA seq
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MPGLDWDLNLAPDSYLQAVARQLSFSPSPASLLPSIPEGSEGQAPETPVVLTSQCTAPPS
SPVTPSGTLYPAPGPTPPPPPPTGASFTTSLAFAPRAPSRSQQPQEAVASARMAEAGASL
GEYQRQRQAALQQQQLRAWEEAAARSRSQQLSLFTVEGGPAGYETKWEELHPVSQGLLLQ
IEDKMREYKYESELLDQCSHLHDPSLYNKSFELDASQTTQEAGSISTIIHGEKVSIKSLM
DVVKEIMWNTDFAIRSYVKLRPRFVHRSAEIANAGYANHSGSSGAHTDFSQLLTMAPTFH
CCSGAPRRPSAFVLHTLARFEDHLGECCKWILELEQLVQVKNDKTFAESLSKVMSNVHDY
LIHVASKVEHIHQYVEIMKTKYLNDRRRRGDSSDPYLEADRREAAKQEPTARIVHPMLHL
SPPDQPATPVAAPMIASQLQQTSFPTVAAFPSSCPTLLLPSVLPPSSTQTSPAQSTNPFS
SSWSVLQSTPFGSASTLTLGSTPATFMCRTSIPSSATSLFPASSGGGTAASGITRRGTKP
PRRRS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcctcgattgggacctgaacctggccccggactcctacctgcaggccgtggct
aggcagctcagcttctccccctcccccgcctcacttctcccgtcgatcccggaaggctcc
gaggggcaggcaccggagacgcccgttgttctcacctcgcaatgcaccgcgcctccgtcg
tcgccggtgacgccgtccggaacgctgtacccggcgccgggcccgacgccgccgccgccg
ccgcctaccggtgcgtccttcacgacgtcgctagcctttgcgccccgtgcgccgtcgcgg
tctcagcagccccaggaggcggtagcatcggcgaggatggcggaagcgggggcgtcgttg
ggggaatatcagcggcagcgtcaggcggcgttgcagcagcagcagttgcgggcgtgggag
gaggcggcggcgcgatcgcggtcgcagcagctgagtctgttcacggtggaggggggtccc
gccgggtacgagacgaagtgggaggagctgcacccggtgtcccaggggcttcttctccaa
atcgaggacaaaatgagggagtacaaatatgagagtgagctgttggatcagtgcagtcac
cttcacgacccatcattgtataacaagagttttgaacttgatgctagtcagactacccag
gaggctggatctatctccaccatcatacacggagagaaggtttccattaagagcttaatg
gatgttgtcaaagaaattatgtggaacacagattttgctatacgttcatatgtaaagctg
agaccaagatttgtccatcgaagtgctgaaattgcaaatgctggttatgcaaatcactcc
ggatcttctggtgctcatactgatttcagtcagctcttgaccatggcaccaacctttcat
tgttgtagtggtgctccaaggcggccttctgcttttgtgctacacacacttgccaggttc
gaggatcatcttggagaatgctgcaaatggattctagaactagaacagcttgttcaagtg
aagaatgataaaacatttgcagaatctctgtcaaaggttatgtctaatgtgcatgactat
ctcatccatgtggcttctaaggtggaacatattcatcaatatgttgaaataatgaagact
aagtatctgaatgatcggcgacgcaggggtgattcgagtgatccttatcttgaggcagat
agaagagaggcagctaaacaagaaccaactgctagaatagtccatccgatgttgcatcta
tcacctccagaccagccagcaacaccagttgctgcaccaatgatagcaagccagctacag
caaacttcattccccactgtagcagcttttccaagctcttgtcctactcttctactgcct
tctgttttgcctccatccagcacgcaaacaagtcctgctcaatcaacgaaccctttcagt
tcatcctggtctgtgttgcagtccacaccatttggttcagcctccacacttacactagga
tccacgccggcaacattcatgtgcaggactagcatcccatcttctgctacttcacttttc
ccagcatcatctggaggtggaacagcagcttcaggcatcaccaggcgagggacaaagcca
cccagaagaaggagctag
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