Phragmites australis (common reed): 133913481
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Entry
133913481 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133913481 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133913481
Membrane trafficking [BR:
paua04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
133913481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
Ig_TPPC8_1st
Ig_TPPC8_2nd
Ig_TRAPPC9-Trs120_1st
Ig_TRAPPC9-Trs120_4th
Motif
Other DBs
NCBI-GeneID:
133913481
NCBI-ProteinID:
XP_062212631
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Position
3:46728209..46741492
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AA seq
1283 aa
AA seq
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MDPLRSYLGRLLLEEITPVVMVLTTPLAEAACRKSGLSFVDMLSPFSLFKKIDVPVRTAS
EVPYRLQMFKVRMVYASDVRKQDYEVADKRIKPVVSEANEKALPDLLADPPQLEDVLGKP
EAELCPLWIKNFNRELMRTLSFSEHETFDHPVACLLVVSSMDKEPISKLVDLFNTNQLPS
LLNEGIMDPQILKHYLVLHDQQEGPQEIAVNVLAEMRSTLGLNDCKLLCINSSTEADGSS
ADDSWLPYKALGLKNHEGACFLNMDDLNEIKDFMQDFASNHIIPYMEQKIRVLNQQVATT
RKGFRNQIKNLWWRKRDDVPEAANGPMYTFTSIESQIRVLSDFAFMLRDYELALSNYRLL
STDYKLDKAWKRFAGVQEMSGLCYFMLDQSRKDAEYCMENAFSTYLRIGSSGQRNATRCG
LWWAEMLKARGQYREASSVYFRISNEEPSLHSAILLEQAASCYLLSSPPMLRKYGFHLIL
AGNSYYMSDQKQHAVRAYRNALFVYKQYPWSYINDHVHFNVGRWYGVLGIFDVASKHLLE
AIACSHQSQTKQSVFLNDFFHFVQSTGNKFDVYKLQLPVFNMSSLRVIYEDHRTYASDAD
VDVSESTWQELEEEIIPSSSIVRTNWLDSQPKSSALRKYKDYCFCVAGEAVKLNIELKNP
LQISVAVSGISLMCQLSTTLDALSSEVSVLTMDAGEDKANTDPSVPIPIFETDENTISVS
KLDIVLGGGESKRVQLDVTPKVEGILKLVGIKWTLSDSVVGYQYFEFDTRKKNKKGKSGP
RRSLTNSLIVIKGLPKLTGCIECMPTRAFAGDLQLLTLNLRNHSDYTVKGIKMKISNPRF
VIPGDSSDIDLEFPHCLRKHAQSEINAVSPKITKEKSRGLLFAFPQDIEIQGGATLSWPI
WFHAATPGKFSLYISLYYDIEGSSDMIYRTLRMHYNLEVLPSLDVSFAISMCSSRLQEYI
VRMDVMNRTPSESFILHQLSCVGSKWVVSALPSCNSISSVETVFANQAVSCFFKIKDFGT
DSCKEEESSSFRSDMALCPGGSTDVFDIARSPLADFHYQERYRQGKLAKGSCSLLDFVLI
SKVVADNSSKSVPGLRLISHHACHCSALNQSPIWWLMEGPRTVSHDFSKSYCEVNVQLVI
HNSVGHKILVRVVTFDGMPNKSRTVHPPDSTSVQGGWYDVSLENDIKAISSAKGTHYEKQ
SSESISPYVWCSLSSAQVELQPESSARVPLKMCIFAPGTYNFSNYELHWKMHPSEGAQVD
ESERWSSGGDQGHPFYVTVLKGA
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctccggagctacctggggaggctcctcctcgaggagatcaccccggtggtg
atggtgctgaccaccccgctcgccgaggccgcctgccgcaagagcggcctcagcttcgtg
gacatgctctccccgttttctctcttcaaaaaaatcgacgtgcccgtgcggacggcgagt
gaggtgccgtacaggctacagatgtttaaagttcggatggtttacgcttctgacgtccgg
aagcaggactacgaggtggcagataagaggattaagccagtggtttccgaggccaatgag
aaggctcttcctgatttgcttgcagacccgccgcagcttgaagatgtacttggcaagcct
gaagctgagctgtgcccgttgtggattaagaattttaatagagagctaatgcgaacactc
tcattttcggagcatgaaacgtttgaccatcctgtggcatgtcttctagttgtgtcatca
atggacaaagaaccaatcagcaaacttgttgatctcttcaacacaaatcagttgccttct
cttttaaatgaaggcataatggatccgcagattctgaagcattatcttgtacttcatgac
caacaagaggggccacaagagattgctgtgaatgtcctagcggaaatgaggagcaccctt
ggtctgaacgattgtaaattgttatgtataaattcttctacagaggcagatggtagtagt
gctgatgattcatggttaccttataaagctcttggtttaaagaatcatgaaggagcctgt
ttccttaacatggatgatttgaatgagataaaggacttcatgcaagattttgcttctaat
catatcatcccctacatggagcaaaagattcgtgtcctcaatcagcaggtagccacgaca
agaaagggttttagaaatcagataaagaacttgtggtggagaaagagagatgatgtccca
gaagctgcaaatgggccaatgtatacattcacctccatagaatcgcagattagagttctg
agcgattttgctttcatgttacgggactatgagcttgctttgtccaattacagattactc
tctacagattataagcttgataaggcttggaagcgatttgctggcgtacaggagatgagt
ggactctgctatttcatgttggatcagtcaaggaaggacgcagaatattgcatggaaaat
gccttcagtacatatctgaggattggatcttctgggcagagaaatgctactagatgtggc
ctttggtgggcagaaatgcttaaagcaagaggacagtatagggaggcatcaagtgtgtat
ttccgcatttctaatgaggaaccttccttgcattctgctatactgcttgagcaagcagct
tcttgctatttgttgtccagtccacctatgcttcggaagtacggatttcacctcatctta
gctggaaatagttactacatgtctgatcagaaacaacatgctgttcgggcttacagaaat
gctctgttcgtttacaaacaatatccatggagttacatcaatgatcatgtacattttaat
gttgggaggtggtatggagtccttgggatatttgatgtagctagcaagcacctgctggag
gccattgcttgtagccatcagtcgcagactaaacaaagcgtgttcctcaacgattttttc
cattttgttcagagcacggggaataaatttgatgtttacaagcttcaacttcctgttttc
aacatgtcatcactcagagttatatatgaagatcatcgcacttatgcatcggatgcagat
gttgatgttagcgaaagcacttggcaggagctggaggaagaaattatcccatcatcatca
attgtcagaactaactggcttgattctcagccaaaatcttctgctttgagaaaatacaag
gactactgtttttgtgtggctggagaggcagtaaaattgaacattgagcttaagaatcct
ctacaaatctctgttgctgtttctggcatctctcttatgtgccaactttccaccactttg
gatgctttaagttctgaggtaagtgtgttgaccatggatgctggggaagataaggctaac
acagatccctctgttccaattccaatatttgagactgatgaaaatactatcagtgtgtca
aagcttgacattgtattggggggaggtgaaagtaaaagagtgcaacttgatgttactcca
aaagttgaaggtattctgaagttagttgggattaagtggacactgtcagattcagtagta
ggctatcaatactttgaatttgacacacgaaagaaaaacaagaaagggaaaagtggccct
cgtcgttctttgaccaacagtctgattgtaatcaagggtttaccaaaacttacaggatgt
attgagtgcatgccaacaagagcatttgctggtgatttacagctcctcacgctaaatctg
agaaaccattcagattatactgtgaagggcataaaaatgaaaattagcaacccaagattt
gtaattcctggtgattcatcagacatcgaccttgagtttccgcactgcttaagaaaacat
gcacagtcagaaataaatgctgtatcgccaaaaattactaaggaaaaatccaggggtttg
ctctttgcatttcctcaggatattgaaatccaagggggagcaacactctcttggcctatt
tggtttcatgctgcaaccccgggaaaattttctctttatatatctctatattatgacatt
gagggttctagtgacatgatataccgtacactgcgcatgcattacaatcttgaggttttg
ccatcacttgacgtatccttcgctataagtatgtgctcatcaagattgcaagagtatatc
gtgcgcatggacgtcatgaacaggactccatcagagtcatttatacttcatcagttgtca
tgtgttggcagtaaatgggtagtttcagcattgccttcatgcaattcgatcagctctgtt
gaaacagtattcgcaaatcaggctgtgtcatgcttcttcaagataaaggatttcggaact
gattcatgtaaagaggaagaaagcagttcctttagaagcgatatggctttatgtcctggg
ggcagtactgatgtgtttgacattgctcgatctcctcttgctgattttcactatcaagaa
agatacaggcaagggaagctagctaaggggtcatgcagccttcttgattttgttctgatc
tcaaaggtggtagctgataactcttccaagtcagtaccaggcttacgactaatttcccat
cacgcatgtcactgcagtgctctaaaccagagccctatatggtggcttatggaaggacct
cgaactgttagtcatgatttctcaaagtcttactgtgaggttaatgtccagttggtgatt
cacaattctgtgggacataagattttggtgagagtggttacttttgatggtatgcccaac
aaaagccgaactgtacatccgccggattctaccagtgttcaaggtggatggtatgatgta
tctctggaaaatgatataaaagcgatctctagtgccaagggtacacattatgaaaagcaa
tcttcggagagcatttcaccgtatgtttggtgttcattgagttctgctcaagttgagttg
caacctgaaagttctgctagagttcctctaaaaatgtgcatatttgcacctggtacatac
aatttttctaattatgagctgcattggaaaatgcatccatctgaaggagcacaagtggat
gaaagtgaaagatggtcatccggcggtgatcaagggcatcccttctatgttacagttctt
aaaggtgcctag
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