Phragmites australis (common reed): 133913552
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Entry
133913552 CDS
T10575
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
paua Phragmites australis (common reed)
Pathway
paua04144
Endocytosis
Brite
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
133913552
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133913552
NCBI-ProteinID:
XP_062212713
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Position
3:47549573..47557581
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AA seq
802 aa
AA seq
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MAAASAAVRMLPNGGADEEERWLAEGIAGVQQNAFYMHRALDSNNLKDALKYSAQMLSEL
RTSRLSPHKYYELYMRAFDELRKLEMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLC
TVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDA
ESINDAVEFVLQNFIEMNKLWVRMQHQGPVREKEKRGKERNELRDLVGKNLHVLSQIEGV
DLDMYKETVLPRILEQVVNCKDDLAQFYLMDCVIQVFPDEYHLQTLETLLSAFPQLQSNV
DIKTVLSQLMDRLSNYAALSPEVLPEFLQVEAFAKFSNAIGKVIEAQPDMPVVGAVTLYV
SLLTFTLRVHPDRLDYVDQVLGACVKKLSGKAKLEDSRATKQIVALLSAPLEKYSNIVTA
LELSNYPRVMDYLDNATTKVMAVVIIQSIMKNTTCISTSDKIEALFDLIKGLTKDMDGAQ
DDELDEEDFKEEQNSVARLIHMLHNDDHEEMLKILCTVQKHILMGGPKRLTFTVPSLVFS
ALKLVRRLQGQDGDVIGEDVPATPKKIFQILHQTIEALLCVPSPELALRLYLQCAEAAND
CDLEPVAYEFFTQAFILYEEEIADSKAQITAIHLIIGTLQRMNIFGVENRDTLTHKTTGY
SAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAAQQMANAARGSS
GSVTLFIEILNKYLYFFEKGIPQITNTVIQDLIELIRTEKQSDNTVADASTEAFFASTLR
YIEFQKQKGGSISEKYEQIKTT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcatcggcggcggtgaggatgctccccaacggcggcgccgacgaggaggag
cggtggctcgccgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgcc
ctcgattcgaacaatctcaaggacgcgctcaagtactcggcgcagatgctctccgagctg
cgcacctcgcggctctcaccgcacaagtactacgagctctatatgagggcgtttgatgag
ctgcggaagctggagatgttcttcagggaggagacccggcgcggcagttgctcagtcgtc
gatctgtacgaactcgtgcagcatgctggcaacgtcttgccgagactctatctcctgtgc
acagtaggatctgtgtacattaaatcaaaagaggctcctgctaaagatgttcttaaagat
ctcgttgaaatgtgccgaggcattcaacatcctctccgcgggcttttcctaagaagttac
ctttctcaaataagccgagacaaactgcctgatattggttctgagtatgaaggggatgct
gaaagcattaatgatgcagttgaatttgttcttcagaatttcattgaaatgaacaaactc
tgggtccggatgcagcatcaggggcctgtccgggagaaggaaaagcgagggaaggaaaga
aatgaactgcgtgatctggtaggcaaaaaccttcatgttctaagccagattgagggtgtt
gaccttgatatgtacaaagaaactgttcttccaagaatattagaacaggtggttaattgt
aaggatgaccttgcacaattctacctgatggactgcgtaatccaagtctttccagatgaa
taccatttacagacattggaaacattattgagtgcatttccccagctacagtcaaatgtt
gatatcaaaacagtgctatctcaacttatggacaggttgtcaaactatgctgccttgagt
cctgaagtattgccagagttcttgcaagttgaagcttttgcgaagttcagcaatgctatt
ggaaaggtcatagaagcccaacctgacatgccggttgtgggagcagtaactttatatgta
tcacttctgacatttactctccgtgtacatccagatcggcttgattatgtcgaccaagtg
ctgggtgcatgtgtcaagaaactttcaggcaaggcaaaacttgaagatagcagggcaaca
aagcaaattgttgcacttcttagtgctcccctggaaaaatatagcaatattgttactgca
ttagaactttcaaactatcctcgggttatggattatctagataatgctacaaccaaagtg
atggctgtggtaataatacaaagcataatgaagaacacaacttgcatatctacttctgat
aagattgaggcactattcgacttaattaaggggctcacaaaagatatggatggggctcaa
gatgatgagcttgatgaagaggactttaaggaggaacagaattccgtagcacgtcttatt
cacatgctgcacaatgatgatcatgaggagatgctgaagatcttatgtacagttcagaag
catatacttatgggaggtcccaagcgtctaactttcactgtgccttcattagtattctcc
gctcttaagttggtcagacgattacaaggccaagatggagatgtcattggggaggatgtt
cctgcaactccgaagaaaatattccagatcttgcatcagactattgaagctcttttgtgt
gttccttccccagaattagctctgagactatatctgcagtgtgcagaggctgccaatgat
tgtgatttggaaccggttgcttatgagttttttactcaagcattcatattatatgaagaa
gaaattgcggattcaaaggctcaaatcactgcaattcacctaataattggaacccttcag
cggatgaatatatttggggtggaaaatagagatacactcactcataagacaacagggtat
tcagcaaagcttctaaagaagcccgaccaatgccgagcagtctatgcatgttctcatctt
ttctggactgatgaccaagatggaataatggatggtgaaagggtcctcctttgtttaaag
cgtgccttgagaattgcaaatgccgctcagcagatggctaacgcagccaggggaagcagt
ggttctgttactctatttatcgaaattttgaacaagtacttatacttctttgagaaagga
attccacagatcacaaatactgtgatccaagatttgattgaattgattaggactgagaag
caaagtgacaatactgtagctgatgcatctacagaggccttctttgccagcacattacgg
tacattgaatttcagaagcagaagggtggaagcataagcgaaaaatatgagcaaataaag
acaacctga
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