Phragmites australis (common reed): 133913561
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Entry
133913561 CDS
T10575
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133913561
03009 Ribosome biogenesis [BR:
paua03009
]
133913561
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133913561
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133913561
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
Helicases
133913561
Pre-60S particles
133913561
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Motif
Other DBs
NCBI-GeneID:
133913561
NCBI-ProteinID:
XP_062212725
LinkDB
All DBs
Position
3:complement(47631451..47636131)
Genome browser
AA seq
636 aa
AA seq
DB search
MSSARPSKKRKQPVAAPPESDSEEEESVYDTASDEEEEMMQQEEQASDEGDEEEQALAQE
QEEGDESEEEVKEVKETGKKKEKKKKEKKKKEKKKKEKKGKTEMKEKEERNEEEGGKEEK
KKEKKKKKGEGSGILTNKMFSELLISELTAKAIREMNYTHLTQIQARSIPPLLEGKDVMG
AAKTGSGKTLAFLIPAIELLYQTRFLPRNGTGVIVVCPTRELAIQTHNVAKELMKYHSQT
VGYVIGGNNRRGEADQLAKGVNLLVATPGRLLDHLQNTKSFMYKSLKCLVIDEADRILEQ
NFEEDMKQIFKRLPQNRQTVLFSATQTPEVENFAKLSFEKNEERKEKPVYVGVDDDKSKA
TVEGLQQGYCVISSEKRFLVLYAFLKKQQSKNKKVMVFFSSCNSVKFHAELLNFLQIDCS
DIHGKQKQQKRTTTFFSFCKAEEGILLCTNVAARGLDIPDVDYIVQYDPPDEPKDYIHRV
GRTARGDKGKGRALLFLLPQELKFIIYLKAARVTLTEYDFNEKKVPNLQSHLENIVCENY
FLNQSAKEAYRSYVLAYDSHSMKDIFDVHQLDLKKVAASFCFRNPPKVNLGLESSASKHR
RKMRRVDGGKRHGIGPSNPYGRKDRDGDDKRQFARF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggccaggccgtcgaagaagcggaagcagcccgtcgccgcccctccggagtcg
gactccgaggaggaggagtcggtctacgacactgcctccgacgaggaggaggagatgatg
cagcaggaggagcaggcgagcgacgagggggacgaggaggagcaagcgctggcgcaggaa
caggaagagggggacgagagcgaggaggaggtgaaggaggtgaaggaaacagggaagaag
aaggagaagaagaagaaggagaagaagaagaaggagaagaagaagaaggagaagaagggg
aagacggagatgaaggagaaagaagaaaggaatgaggaggaggggggaaaagaggaaaag
aagaaggagaagaagaagaagaagggggagggaagtgggattctgacgaacaagatgttc
tcggagctccttatctccgagctcactgccaaggccatcagagagatgaactacacccac
ctcacccagattcaagctagatcgatcccgcctctgttggaaggaaaggatgtgatgggc
gcagccaaaactggctcggggaagactcttgcattccttataccagcaattgagctgctc
tatcaaacgcgtttcttgccaaggaatgggactggagttatcgtggtttgcccaacaagg
gagcttgctatccagacacacaatgttgccaaggagttaatgaagtatcactcgcaaact
gttggatatgtaattggcggtaataaccggagaggtgaagctgatcagctcgcaaagggg
gtcaatttattagtcgctacaccaggcaggcttttggaccatctacaaaataccaagagt
ttcatgtacaaaagtctaaagtgccttgtaattgatgaagctgatcgtatacttgagcaa
aactttgaggaagatatgaaacaaatatttaaacgccttcctcagaacaggcagactgtt
cttttttctgctacacagactccagaggttgaaaattttgctaagttgtcatttgagaaa
aatgaagaacgtaaagaaaaaccagtttatgttggagttgatgatgataaatcaaaggct
actgttgaaggtttacagcagggctattgtgtcatttctagcgagaaaaggttcctggtt
ctgtatgctttcctcaaaaagcagcagtcaaagaataagaaggtcatggtgttcttttca
tcatgtaattcagtcaaattccatgcagaacttctgaatttccttcagatagactgttct
gatatccatgggaaacaaaagcagcagaaacgaactacaacattctttagcttttgcaag
gcagaagagggcatcttattgtgcaccaatgtggcagcacgtggacttgatatccctgat
gtggattatattgtacaatatgatcctccggatgaaccaaaggattacattcacagagtt
ggtcgtactgcacgtggtgataaaggaaaaggaagagcattactgttcttactaccacaa
gaattaaagtttatcatttatctgaaggcggccagggttactctgacagaatacgatttc
aatgaaaagaaggtgccaaacttgcaatcacacctcgagaatattgtttgtgagaattac
ttcctaaaccagtcagcaaaagaagcctacagatcctatgttttggcatacgactcacac
tctatgaaagacatttttgatgtccatcaactagatctgaagaaagtagcagcatctttc
tgcttccggaaccctccaaaagtgaatctcggcctggagagcagtgcatcgaaacatcgg
aggaaaatgaggagagtggatggtgggaagaggcatggtatcggaccttcgaatccttac
ggaaggaaagacagagacggtgatgataaacgacagttcgcaagattctaa
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