Phragmites australis (common reed): 133913601
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Entry
133913601 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 7-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133913601
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133913601
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_3rd
Motif
Other DBs
NCBI-GeneID:
133913601
NCBI-ProteinID:
XP_062212812
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All DBs
Position
1:2348134..2350855
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AA seq
461 aa
AA seq
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MMLKDLAAIQQQQLAAEENMSNLTSASGDQTSVSSHPLPPPAKRKRSLPGNPDPDAEVIA
LSPRTLMATNRYVCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRNPKEVVRKKVYVCPEPG
CVHHDPARALGDLTGIKKHFSRKHGEKKWKCDRCAKRYAVQSDWKAHSKVCGTREYRCDC
GTLFSRRDSFITHRAFCDALAEESARAVAVAGQHPGMLFSHAGVGDSSGLQLPAVLDPSQ
QLGGHGLSLQEMCLKREQQQFAPSWLTAQQQQQLEMAGAGNASVFGSARLDQEYIGSSTP
ESTAQPAGLSFGFSQSAAGTASTHMSATALLQKAAQMGATLSRPSSQGQMASTYSTSTTN
VGTANAAAANSNVTSTGAGAGSGLAFGASHFGADERARTDRDAGSGGNAVGGNDGLTRDF
LGLRAFSHGDILSMAGFDPCMSSTSAAAYEQGHQSSKPWHV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaaggatctggcagcaattcagcagcagcagctggccgctgaggagaacatg
tcgaacctgacatccgcctccggcgaccagaccagcgtctcctcccaccccctccctcct
cccgccaagaggaagcgcagcctcccggggaatccagaccccgacgcggaggtgatcgcg
ctgtcgccgcggacgctgatggcgacgaaccggtacgtgtgcgaggtgtgcggcaagggg
ttccagcgcgaccagaacctgcagctgcaccggcgcgggcacaacctgccgtggaagctc
aagcagcgcaaccccaaggaggtggtgcgcaagaaggtgtacgtgtgcccggagcccggc
tgcgtgcaccacgacccggcgcgcgcgctcggcgacctcactggcatcaagaagcacttc
agccgcaagcacggcgagaagaagtggaagtgcgacagatgcgccaagcgctacgccgtg
cagtccgactggaaggcgcactccaaggtctgcggcacgcgcgagtaccgatgcgactgc
ggcaccctcttctcaaggagggacagcttcatcacgcacagggcgttctgcgacgcgctc
gcggaggagagcgcgagagcggtggcagtggcgggacagcacccggggatgctcttctca
cacgccggtgtcggggatagctcggggctgcagctgccggctgtgctggacccgtcgcag
cagctgggcgggcacgggctgtccttgcaagaaatgtgcctcaagagggagcagcaacag
ttcgcgccgtcgtggctcacggcgcagcagcagcaacagttggagatggccggcgcgggc
aacgcatccgtgttcgggtccgcgaggcttgaccaggagtacatcggcagctccacgccg
gagagcaccgcgcagccggcgggcctgagcttcggattctcgcagtccgccgctggcacg
gcctcgacgcacatgtcggccaccgcgctgctgcagaaggcggcgcagatgggtgcaacg
ctgagccggccgtcgagccaaggccagatggcgagcacttacagcaccagtaccaccaat
gttggcactgccaatgcagcagctgctaatagcaatgtgactagcacgggcgctggcgca
ggctctggcctcgccttcggggcatctcactttggagcggacgagagggccaggactgat
cgagacgcaggcagcggcggcaatgccgtaggcggcaacgacggcctcaccagggacttc
ttgggtttgcgggcgttctcccacggcgacatacttagcatggccgggttcgatccctgc
atgtcgtcgacctcggcggcggcgtatgagcaagggcaccagagcagcaagccgtggcat
gtctag
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integrated database retrieval system
