Phragmites australis (common reed): 133913623
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Entry
133913623 CDS
T10575
Name
(RefSeq) probable DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133913623
03400 DNA repair and recombination proteins [BR:
paua03400
]
133913623
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
133913623
DNA replication proteins [BR:
paua03032
]
Prokaryotic type
DNA Topoisomerases
133913623
DNA repair and recombination proteins [BR:
paua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
133913623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4890
Motif
Other DBs
NCBI-GeneID:
133913623
NCBI-ProteinID:
XP_062212805
LinkDB
All DBs
Position
3:complement(48266690..48279770)
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AA seq
931 aa
AA seq
DB search
MALSAALRLPLPRLLLLGPSASILGATSRRRAAAAPAAALHFLSASSLRYSSSSRSVRPL
RARRRDRDDDGRAASAGGTGGGEGDGGGVAVKERVVPVELHKEATEAYMAYAMSVLLGRA
LPDVRDGLKPVHRRILYAMHEMGLASRRPFRKCARVVGEVLGKFHPHGDSAVYESLVRMA
QDFSMRYPLVQGHGNFGSIDADPPAAMRYTECRLDSLTEAMFLTDLELNTVDFVPNFDNS
QKEPSLLPARVPSLLLNGSSGIAVGMATNIPPHNLGELVDALSVIIENPEATLQELLECM
PGPDFPTGGLILGNQGILEAYKSGRGRVVVRGKTDIETIDEKSKRTAIIIKEIPYQTNKA
TLVERIAELVEDKVLEGISDIRDESDRSGMRVVIELKRSADPAIVLNNLYRHTALQSSFS
CNMVAILDGQPKLMGLKEILQAFLDFRCSVIERRARFKLSQALERKHIVEGIVVGLDNLD
AVIQIIRETSNHAAATEALVKEFDLSEKQAEALLDITLRKLTSLERKKYVDEAKTLSEEI
SKLNELLSSKKLIFQLIQEEAAELKNKFATPRRSFIEDSISSEVDDIDIIPNEEVLLILS
EKGYVKRMNPNTFNLQHRGTIGKSVGKMRMNDSMSDFIVCQTHDHVLYFSDKGIVYSARA
YKIPECTRIAAGTPLVQLLSLSDGERITSIIPVSEFGEDQYLVMLTINGYIKKVPLNAFS
TIRSTGIISIQLVPGDELKWVRHCGNDDLVAFASQMGMVIVNSCNKLRALGRKTRGVVAM
KLREDDKMAAMDIIPATMHKMPERYNSRVRDLSPPWLLFIAENGLGKRVSLNAFRQGNFN
RVGLQGYKLPPDCRLAAVFFAGFSLTDEGESDEQVVLVSQSGTANRIKVKDISIQSRAAS
RGVILMRLEHAGKIQSASLISAAAAEQVVED
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccctctccgccgcgctccgtctcccgctcccgcgcctcctcctcctcgggccctcc
gcttccatcctcggcgccacctcccgccgccgcgctgccgctgcccccgcggccgctctc
cacttcctctccgcctcgtccctcaggtactcgtcctcctcgaggtccgtgcggcctctc
cgcgcgcgccgccgcgaccgcgacgacgatgggcgcgcggcgtcggccggcgggaccggg
ggcggggagggggacggagggggagtggcggtcaaggagcgggtggtgcccgtggagctg
cacaaggaggctacggaggcgtacatggcgtacgccatgtccgtgctgctcggccgcgcg
ctccccgacgtccgcgacggtctcaagccagtgcaccgcaggatactctatgccatgcat
gagatgggtcttgcgtctcgtaggccattcagaaaatgtgccagagttgttggtgaggta
ctaggtaagtttcatccacatggagattcggccgtatatgaaagcttggtgagaatggct
caggatttttcaatgaggtacccacttgttcaaggacatggaaactttggctcaatagat
gcggatcctcctgctgcaatgcgatatacagagtgccgcttggattcattaacagaagcc
atgttcttgactgatctggagctgaatacggttgacttcgtcccaaactttgataattca
cagaaagaaccgtctctgctgccagctcgtgttccatctttattgttgaatggctcttca
gggatcgcggttggaatggcaacaaacattcctcctcataatctgggggaacttgttgac
gcactctctgttataattgaaaaccctgaagctacactccaagaactactagaatgcatg
cctggtcctgacttccctaccggagggttaatcctaggaaatcaaggtattttggaagca
tataaatctggacgtggccgagtcgttgtgagaggcaagactgacatagaaacaattgat
gagaaaagcaagcgcactgctattataattaaagagattccataccaaacaaacaaagcc
actcttgtggaaaggatagctgagcttgttgaagacaaggtattagaaggcataagtgac
attcgggatgaaagtgatcgctctggaatgcgtgtagtaattgagctgaaaagaagtgca
gatcctgccattgtcctgaacaacctgtaccgtcatacagctctgcagtctagttttagc
tgcaacatggtcgcgatacttgatgggcagccaaaattgatgggactgaaggaaattctt
caggctttccttgacttccgatgttctgttattgaaaggcgtgcaagatttaagctttca
caagctctagaaagaaaacacattgtggagggcattgttgttggtcttgacaatttagat
gctgtgattcaaataataagggaaacatcaaatcatgctgcggcaacagaagctttagtc
aaggaatttgatctatcggagaagcaagctgaagctctgttggacatcacacttaggaaa
cttacttcccttgagcggaaaaagtatgttgatgaagctaaaactttgtcagaggagatt
tctaagttaaatgagcttctgtcaagcaagaagcttatctttcagcttatacaagaagaa
gcagctgaattgaaaaacaaatttgctacaccgcggcgttctttcatagaagattcaata
agcagtgaagttgatgatattgatattattccgaacgaggaagtgcttttgatccttagt
gagaaaggctatgttaagcggatgaaccccaacacattcaatttacaacatcgaggaaca
atcggaaaatctgtgggaaagatgcgaatgaatgacagcatgtctgatttcattgtctgc
cagacgcatgatcatgttctttacttcagtgacaagggaatagtatactcagcacgtgct
tataagataccggaatgcacgagaatcgctgctgggactccgttggtacagctgctatct
ttgtccgatggcgagcggataacctccatcattcctgtgagtgaatttggtgaagaccaa
tatctagtgatgctcaccattaatggctatatcaagaaagttcctcttaatgctttttca
acaatcaggtctactgggatcatatcaatacagctggttcctggtgatgagctcaagtgg
gtccgtcattgtgggaatgatgacttggttgcttttgcttcacaaatggggatggttata
gtcaactcatgcaacaagcttcgtgcccttggaaggaaaacaaggggtgttgttgcaatg
aagctaagagaagatgataagatggcagccatggatataattccagcaacaatgcacaaa
atgcctgaaagatataacagcagggtcagagatttgagtcctccatggctgcttttcata
gctgaaaatggtttggggaaacgtgtgtccttaaatgcattccgacaagggaatttcaat
agagtaggcttgcaaggctacaagcttccaccagattgtcgcttagctgctgtatttttt
gctggtttttcactcactgatgagggtgaaagtgacgagcaggttgtcttagttagccag
agtggtactgcaaacagaatcaaggttaaagatatatccatccagtctcgtgcggcaagc
aggggagttattctgatgaggctggaacatgccggaaagatccagtcagcttcactgata
tcggcagcagcagcagaacaggtcgttgaagattaa
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