Phragmites australis (common reed): 133913631
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Entry
133913631 CDS
T10575
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133913631
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133913631
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
U-box
HVO_0758
Motif
Other DBs
NCBI-GeneID:
133913631
NCBI-ProteinID:
XP_062212818
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Position
3:complement(48362163..48369579)
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AA seq
632 aa
AA seq
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MASPPGANRAASSSSGAPLPFPFPVAAHFPSRAAGHFLRQQHLPATSDGDEEVEEDEGSM
DDDSGEEEAELVGGAARGSRQRCASSSPGIERAVLDGENGASHIQEGHQWQQHSHVYNRG
TEQYVRTSSGGDEPGTIPRDKRVENGYGVIGRREGGPASSYWDLLRAHLSDPLTGILMDD
AMILSCGHSYGSSGMQHIYRMKACGKCGQPITEDSIRPNLALRLAVQALKREEESAKALK
RRRERLEQVYTLFPRLAAPVRTAAMERELLETFEAAKKAADAAAGEADSPEADRCLDALR
RLRAIRVNTDVLVSTQLGKRLRYLTKHPHSDIQAVATDLFGYWKKVVLEETGKKNGTSEN
EKLSISSAKAEKAQPMKVDKNSASASVKVEKRDADVRDQKPAFFKVEKITNNDSKAQPVK
VERVSNEVSRTPGTKKPSSVPNGPPKLTSLVKCNDPTRDKIRELLAEAFSKVSGETSKDD
REEVRNILDEVDACDPFRVAVTVESALFEKLGRSTGAHKAKYRSIMFNLRADNNTDFRRR
VLIGQVRPGRLPDVSPEEMASDARKLENKQIKEKALFDCERGGAPKATTDQFKCGRCGQR
KTTYYQLQTRSADEPMTTFVTCVNCNNRWKFC
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctccaggggcgaaccgcgcagcctcctcctcgagtggggcgcccttgccg
tttcccttccccgtcgcggcccacttcccctcccgcgccgccggccacttcctccggcag
caacacctgcccgccacctccgacggcgacgaggaggtcgaagaggatgagggcagcatg
gacgacgacagcggcgaagaggaggccgagctggtgggcggggcggcccgcggctcgcgg
cagcggtgcgcctcctcctctccaggaatcgagcgggcagtgttggatggggagaatgga
gcaagtcacatccaagaggggcatcaatggcagcagcacagccatgtgtataaccgtgga
accgagcaatatgttcgtacttcgtccggaggggacgaacctggtactatccccagagac
aagagggttgagaatggatacggagttattggaagaagagaggggggtcctgcatctagc
tattgggacctgctgagagcacacctctctgatccgttgacaggtattctcatggatgat
gctatgattctatcatgcggccattcatacggaagtagtggaatgcaacatatctacaga
atgaaagcttgtggcaaatgtggtcagccaattaccgaggactccattagaccaaactta
gctcttcgccttgcagttcaggctttgaaacgtgaagaagagtcagcaaaagcattgaaa
agaagaagagagcgccttgaacaggtatacacccttttccctcgcctcgccgcgccggtc
cgcaccgccgccatggagagggagcttctggagacattcgaggcggccaagaaggcggcc
gacgcggcagccggggaggccgactcgccggaggccgaccgctgcctcgacgcgctgcgg
cggctgcgcgccatccgcgtgaacaccgacgtcctcgtctccacgcagcttggcaaacgt
cttcggtaccttactaagcaccctcactcagacattcaggcagttgctacagaccttttt
gggtactggaaaaaggttgttcttgaagagacaggaaagaaaaatggcacctcagagaat
gaaaaattaagtatctcttcagcaaaggctgagaaggctcagcccatgaaggttgataaa
aattctgcatcagcaagtgtaaaggttgagaaaagagatgcggatgtcagggaccagaag
cctgcttttttcaaagttgagaagatcactaataatgattccaaagctcaacctgtgaag
gtagagagggtttctaacgaagtcagtagaactcctggtacaaagaagccatcatctgtg
cctaatggtcccccaaagcttacgtcccttgtcaaatgcaatgatcctacccgagataaa
atccgggaactacttgctgaagccttctcaaaggtttctggagagaccagcaaggatgac
agagaggaagtgagaaacatcttagatgaagtagatgcatgcgacccattcagagttgct
gtgacagtggagtctgcactatttgagaagcttggacgttccactggagctcacaaggca
aaatacaggtcaatcatgttcaacctgagggccgacaacaatactgattttcggagaagg
gttctcatcggtcaagtgaggcctgggaggcttccagacgtatcccccgaagagatggcc
agtgatgcaaggaagcttgagaataaacagatcaaggagaaggctctgttcgattgtgag
cgtggaggagcaccaaaggcaacgaccgatcagttcaagtgtggcagatgtggccagcgc
aagacgacttactatcagctccagactcggagtgctgatgaaccgatgacaacatttgtg
acatgcgtgaactgcaacaatcgctggaagttctgttga
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