Phragmites australis (common reed): 133913696
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Entry
133913696 CDS
T10575
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3B, chloroplastic
Organism
paua Phragmites australis (common reed)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
DD_DDX21-DDX50
ResIII
zf-CCHC
AAA_30
CMS1
YgbB
zf-CCHC_2
ERCC3_RAD25_C
AAA_19
DUF1191
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
133913696
NCBI-ProteinID:
XP_062212898
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Position
3:49014958..49023611
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AA seq
752 aa
AA seq
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MASLLTLPAPAPALALSNPTSSSSVRLQASAFRCWALRRRGWVAAAVASPNSVLSEHAFK
RLQLGSDDEDEEVAYGSDGDEGVEAGAGEGLQGGEEELAIARLGLPDELVATLEKRGITH
LFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKRLIEDDDGQSMRRGRIPRVLVL
APTRELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGG
SLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLN
NPLTIDLVGDQDEKLAEGIKLYAIPLTATSKRTILSDLITVYAKGGKTIVFTRTKRDADE
VSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE
LPNDPETFVHRSGRTGRAGKVGNAILMFTSSQKRTVRSLERDVGCKFEFISPPSMEEVLE
SSAEHVIATLRGVHPESTQSFLPAAERLTEELGPHALASALAHLSGFSQPPSSRSLISHE
QGCVTLQLTRDSGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYLTADENVQGAVFDLPEE
IAKDLLTMELPPGNTITKITKLPALQDDGPATDSYGRFSNDRGSRNRRSRGGGGQRGRGS
WDSDGEDRFRRGGRSFRSDNDSWSDDDFSGGGRRSNRSSSFGSRSSSYSSRGSPSFGGRS
SSFGGRESNRSFSGACFNCGESGHRASDCPNK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcctcaccctccccgctcccgcccccgccctcgccctctccaaccccacc
tcctcctcctccgttcgtctccaggcgtccgccttccgctgctgggcgctccggcggcgc
gggtgggtggcggcggccgtcgcctcgcccaactccgtgctcagcgagcacgccttcaag
cgcctccagctcgggagcgacgacgaggacgaggaggtagcgtacgggagcgacggcgac
gagggagttgaggcgggagcgggggaggggttgcaggggggcgaggaggagctcgccatt
gccaggctcggcctgcccgacgaactcgtcgccacgctcgagaagcgcggaatcacccac
ctcttccccatccagagggccgtattgattccagctcttgagggccgcgacctgattgct
agggcaaagactggaactggaaagacactagcctttggtatacccatgatcaaacgatta
attgaggatgatgatgggcagagtatgaggcgaggtcgtattcctcgggttttggttcta
gcacctactagagagttagccaaacaagttgagaaggaaataaaggaatcagcacccaag
ctcagtacagtgtgtgtttatggtggtgtctcatataatgtccagcagaatgcactatca
cgtggtgttgatgttgttgttggaacaccgggccgtataattgatttgataaatggcgga
agccttcagttgggggaagttcagtatttagtccttgatgaggctgaccaaatgcttgca
gtcgggtttgaggaagatgtggaaacaatattacaacagctgcctgcagagaggcaaagc
atgcttttctctgcaacgatgcctagttgggtgaagaaattgtctaggcggtacttgaac
aatcctttgacaattgacttggtcggtgatcaagatgaaaaacttgctgaaggaatcaaa
ctctatgctatcccactcacagcgacatcgaagcgcaccattcttagtgatctaattacg
gtatatgcaaagggtgggaaaaccattgttttcactcggacgaaacgggatgcagatgaa
gtatcattggcactgacgaacagtattgcttctgaggcacttcatggtgatatttcacaa
catcagcgtgagaggacactaaatggttttcgtcaagggaaatttactgttctagtagca
actgatgttgctgctcgtggtctggatataccaaatgttgatttgattatccattacgaa
ttgccaaatgatccagagacttttgttcatcgttctggacgcactggacgggctgggaaa
gttggaaatgcaatcttgatgtttacaagcagccagaaaaggacagttagatcacttgag
cgtgacgttggttgcaagtttgagtttatcagccctccgtcaatggaagaagtgttggag
tcatctgcagagcatgttattgctactttgcgaggggtgcacccagagtcgactcaatcc
tttcttccagcagctgagagattaacagaagaattaggacctcatgctcttgcttctgca
ctggcacatctgagtggattttctcagccaccttcttcacgttctctgatcagtcatgag
cagggatgtgtgacattgcaactaactagagattcgggatatggaagaggcttcttttcc
ccaagatccgttactggttttctatctgatgtttgttcggctgctgcagatgaagttggc
aaaatatacctaacagcagatgaaaacgtccaaggagcagtctttgatttacctgaggag
attgcaaaggatttgcttactatggaactcccgccaggaaacaccataaccaaaattaca
aagctgcctgcattgcaagatgatggtcctgctactgatagctatggtcgcttttcaaac
gaccgaggttccaggaacagaaggtccaggggaggcggcggccaaagaggccggggtagt
tgggactctgacggtgaagaccgatttcgccgtggtggcaggagcttcagatctgacaat
gatagttggtcagatgatgacttctcaggcggtgggagaagatcaaaccgttcctcatcc
tttggtagtcgctcatcatcttacagtagccgtggctcaccatcctttggaggccgctca
tcatcctttgggggtagggagagtaacagaagcttcagcggtgcttgcttcaactgcggc
gaatcagggcaccgagcatcagactgcccaaacaagtag
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