Phragmites australis (common reed): 133913750
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Entry
133913750 CDS
T10575
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133913750
Membrane trafficking [BR:
paua04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133913750
Protein recycling
Other Rab GTPase associated proteins
133913750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
133913750
NCBI-ProteinID:
XP_062212972
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Position
3:49568606..49572371
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AA seq
442 aa
AA seq
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MYVRWIATCVRSKYIICRTERRFSSSIATLQVLCYADCRDFTSSLGHCQERWKRKQEPEA
YPRTRYGSSLHTAHANSTRSARSLATPCDGEPHVGDVAAGLLRLPRPHAPPRRRRPLPFH
QELRARSFLVSFSFHEPNAEDGSKVQAFLAEMESAIRDHPLWASATNQEIDHALEGLEKY
VMTKLFNRTFGSSAEDAITDMEISEKIGLLQQFVKPQHLDIPKVLHNEASWLVAVKELQK
INSYKAPREKLLCVMSCCQVINNLLLNVSMSNDRTLSGADEFLPILIYITIKANPPQLHS
NLKFVQLFRRETKLISEVEYYLTNLISAKMFIINANARSLSMEESEFQKHMELARLSTQI
SVASPSSSQGLPASAKALHEESDIAGSRFPFMDSETESLTTGEVKQLHDLYRQVVTRYTL
LSKALRKLSIDEDQLLNSVHDS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttagatggatagcaacctgtgtgcgttctaaatacataatttgtcgaaccgag
cgacggttctcatcatccattgccacactgcaagtgctatgctatgcagattgcagagac
ttcaccagttcacttggacattgtcaggaacggtggaaaaggaaacaagaaccggaagcc
tacccgcgcacacggtacggctcctccttgcacacggcacacgcaaacagcacgaggtca
gcacggtcgctggcgacgccttgcgatggagagccccacgtcggcgacgtcgcggccgga
cttctacgacttcctcgaccgcatgcgccgccccgccgccgccggcctcttccgttccat
caagagcttcgcgctcgcagcttcctggtgtccttctccttccacgagcccaacgccgag
gacggcagcaaggtccaggccttcctcgcggagatggagagcgccatcagggaccacccg
ctctgggccagcgccaccaatcaggagattgaccacgcgctcgagggccttgagaagtac
gtcatgacgaagttgttcaaccgcacgtttggatcgtccgcggaggacgcgatcaccgac
atggagatctcggagaagattggtctcctgcagcagtttgttaagcctcagcacttggat
atacccaaggttctgcataacgaggcgtcctggctggttgcagttaaagagttgcagaag
atcaattcctacaaagcaccacgtgagaagcttctatgcgtcatgagctgttgccaagtc
attaataacttgcttctgaatgtatcaatgtcaaatgatcgaacactatctggggccgat
gaattccttcctattcttatctatattactattaaggccaatcctcctcagctgcactca
aatctgaagtttgttcagctcttcagaagagaaacaaagcttatctcagaagtcgaatat
tatctgacaaatctcatttcagcaaagatgtttataataaatgccaatgcccgctcacta
tctatggaagaaagtgagtttcagaagcatatggaattggcaagactaagtactcaaata
tctgttgctagccctagtagttcacagggacttcctgcatcggccaaggcacttcacgag
gaaagtgatatagcaggctccagattccccttcatggactcagaaaccgaaagtttgaca
acaggggaagtcaagcaattgcatgacctctataggcaagtagtcaccagatatacacta
ctgtctaaagctttaagaaagttatccatagatgaggatcagctccttaattcagtacat
gattcatga
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