Phragmites australis (common reed): 133913811
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Entry
133913811 CDS
T10575
Name
(RefSeq) heat stress transcription factor A-1-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133913811
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133913811
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GFIT
Motif
Pfam:
HSF_DNA-bind
TMF_TATA_bd
CENP-F_leu_zip
BRE1
APG6_N
XhlA
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
133913811
NCBI-ProteinID:
XP_062213061
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Position
3:50016684..50021029
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AA seq
518 aa
AA seq
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MEGGIAAAAAAAAAAAAVTTAVAPPVAPAPAAAAHAAVGNGGAAAAPPPPFLMKTYEMVD
DPATDDVVSWGAGNNSFVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWE
FANEGFLRGQKHLLKTINRRKPSLQGNNQPQQPQLQNTPLPACVEVGKFGLEEEIERLKR
DKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMESRQQQMMSFLAKAMQSPGFLAQFVQQ
NENSRRRTVAVNKKRRLPKQDGGLDSESASLDGQIIKYQPMINEAAKAMLRKILKLDASH
RFESVGNSDNFLLENYLPTAQGFDSSSSTRNSGVTLAEVPANPGLPFIATSSGLSAICSP
STTPEIQGPVMLDNNSSRQLPDMSAVPPVPKPMTAGPSDITIPEFPDLQDIVTEHSVNIP
GGSFGMPCPEGVFPLPEEGDDSVPIETDEILYNDETQKLPGIIDSFWEQFLVASPISVDN
DEVDSGVMETPHENGWNKVENLANLTEQMGLLSSNHRV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggtatcgcagcggctgctgccgctgctgcggcggcggcagcggtgaccacg
gcggttgccccgcctgtggctccggctccggctgcggcggcgcacgcggcggtgggaaac
ggcggggcggcagccgctccgccgccgccgttcctgatgaaaacttacgagatggtggac
gacccggccacggacgatgtcgtgtcctggggggccgggaacaacagcttcgtcgtctgg
aacacgcccgagttcgcaagggacctcctccccaagtacttcaagcacagcaacttctcc
tccttcgtcaggcagctcaacacctacggctttagaaaggttgatccagatagatgggaa
tttgcaaatgagggttttttgagaggacaaaaacatctgctgaagaccatcaacagaagg
aaaccatcgttgcaggggaacaaccaaccgcagcagccccaattgcagaacactcctttg
cctgcttgtgtggaggtgggtaagtttgggttggaggaggagattgaacggctcaaaagg
gacaagaatgttctaatgcaagagcttgtcaggctcagacagcaacagcagacaactgac
catcagctgcagactttgggcaagcgtcttcaagggatggaatcacggcagcaacaaatg
atgtctttcctggctaaagccatgcaaagtcctggtttcctagcacagtttgtccagcaa
aacgagaatagcagaagaagaacagtagccgtgaacaaaaaaaggaggctacctaagcaa
gatggtggcctagactctgaaagtgcttcgttggatggtcaaattatcaaatatcagcct
atgatcaacgaagcagccaaggcaatgctaaggaagatcctaaagctagatgcttcacat
agatttgaatctgtgggcaattcagataattttctactggaaaattatttgccaactgct
caaggatttgacagctcttcatcgacgaggaattctggggtcacccttgcagaggttcca
gctaacccaggtttgccatttatcgctacgagttctggactatcagctatttgttcacct
tcgacgactcccgaaatccagggcccagttatgttggacaacaactcatcaagacaactt
cccgacatgagtgctgtgcctcctgttccaaagcctatgacagcaggtccaagtgatatc
actattccggaattcccagatctgcaagatatagtaactgaacactctgttaacattcct
ggagggagctttggaatgccttgtcctgagggtgtatttcccctgcctgaagagggtgat
gacagtgtccccatcgagactgatgaaattttgtacaatgatgagactcagaaacttcca
ggcatcattgattccttctgggagcagttcctggtagctagcccaatatctgttgataac
gatgaagttgattcaggtgtaatggaaacaccacatgagaatggatggaacaaagtggag
aacttggcaaatcttacggagcaaatgggccttctgtcatctaatcacagggtgtga
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