Phragmites australis (common reed): 133913832
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Entry
133913832 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133913832
KO
K23325
transducin beta-like protein 2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
paua03012
]
133913832
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133913832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR41
NBCH_WD40
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
DUF7899
Nucleoporin_N
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_EIPR1
DUF6476
Motif
Other DBs
NCBI-GeneID:
133913832
NCBI-ProteinID:
XP_062213087
LinkDB
All DBs
Position
3:50262052..50267140
Genome browser
AA seq
443 aa
AA seq
DB search
MAAASLVSSLTVPLVSAALGAAIALVFLAGYLRRKRGAIAHIPPTAAPDQPKHVRPSSQA
QHKKGHLRPHHHTADKDAAKKHHHLDVNTLRGHTDSVTALHFSDDGHDLVTVCADGAARV
FRIDDTSSKSFKILRINLPAGAHPTAVAFSEGSSSVVVAAQALLGSSLYMYADVSAPPTA
EKKQQGKLSPPEIKWKHHKIHGKESVLNLAAARATYGSGDGSTILISCSEATDIKVWHGK
SGKELGTVDTNQLKNNMVDISPNGRFIAAAAFTADVKVWEIVYWKDSSVKEVNRVMQLKG
HKSAVTCLCFAPNSEQIITASKDGSIRVWNINVRYHLDEDPKTLKVFSIPLHDSKGSVCL
YDHMSISPDGKVLAVTSGSTLQWLCAETVAVLDTAEKAHEGDITGIAWAPQTVPNGGVPG
FILATAGVDKKVKLWLAPEVRST
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcctcacttgtgtcatcgctcaccgtgcccctcgtctccgccgccctcggc
gccgccatcgccctcgtcttcctcgccggctacctccgccgcaagcgcggcgccatcgcc
cacatccctcccaccgccgcccccgaccagcccaagcacgtacgcccctccagccaggcc
cagcacaagaagggacacctccgcccgcaccaccacaccgccgataaggatgctgcgaag
aagcaccaccatcttgatgtcaacaccttgagggggcatactgactcagtcactgcactt
cacttctccgatgatggccatgacctagtcaccgtatgtgcggatggagctgcgagagta
ttcaggattgatgatacttcaagcaagagctttaagattcttaggataaacttgcctgct
ggggctcatcctaccgctgttgctttctcagagggttcatcatctgttgttgtggcagca
caggctcttctgggctcatctctctatatgtatgcggacgtcagtgctcctccaactgca
gaaaagaagcagcagggcaagctttctccgcctgaaatcaagtggaaacaccacaagatt
catggcaaggagtcagttctgaaccttgcagcggcccgtgcaacttatgggtccggtgat
gggagtactatacttatttcgtgctcagaagcaactgatatcaaagtttggcatgggaag
agtggaaaggagttaggaacagttgacaccaatcagttaaaaaataatatggttgacata
tccccaaatggccgcttcatagctgctgcagcgtttactgctgatgtcaaggtgtgggag
atagtttattggaaggatagctctgtgaaggaggttaacagagtcatgcaactcaagggt
cataagagtgctgttacctgcttgtgctttgctccgaattctgagcagattattactgca
tccaaagatggttccattcgagtgtggaacattaatgtaaggtatcaccttgacgaggat
ccaaaaaccttgaaagttttctcaattccactgcatgactcgaaaggttctgtttgcctc
tatgatcacatgagcatctctcctgatggtaaagttctggctgtaactagtggatcaaca
ttgcaatggttatgtgcggaaactgttgctgttttagatacagctgagaaggcacacgaa
ggtgatataactggcattgcttgggctccgcagacagttcccaatggaggcgtgcctggg
tttattttagcgactgctggtgtggacaaaaaggtgaaactttggttagctccagaggtt
cgttcaacatga
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