Phragmites australis (common reed): 133914813
Help
Entry
133914813 CDS
T10575
Name
(RefSeq) F-box protein SKIP22-like
KO
K10293
F-box protein 7
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133914813
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133914813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
F-box-like
F-box
bHLH_SAC51
bHLH_ILI
Motif
Other DBs
NCBI-GeneID:
133914813
NCBI-ProteinID:
XP_062213802
LinkDB
All DBs
Position
4:complement(42177331..42186310)
Genome browser
AA seq
884 aa
AA seq
DB search
MKLRLRSMEARGGGATAETHRIDLPPTATLADLRALLAAKLFAAQPVPAESVRLSLNRSE
ELVSPVPTATLPALGLASGDLVFFTLYPLKPLAPPAQNLPRNLSPGSASIAKAVDRGKCP
EQPGTGGSSSLAQAVDANPRVPAASCPPDAVMAEAVDATKGWSSCVLRDLKREVENAGGA
EGTVVGRLVAALHAALFDAGFLTSNPMGSHLSLPRDWPSGALEPLTIKYTIPELVTILPV
AEEGKVAVLNFSLIGNFVMVYGYVPGAQSEVRRLCLELPKLEPLLYLDSHRLSEVQEREI
LELWRVLKDEMCLPLMISLCQLNNLGLPPCLMALPVDLKTKVLELVPGVDLARVECTCKE
MRNLAADDNLWKKFVVKFKDHGEGSRGRMSAKARFVEIWTANKRRLKRPSPTFWNYGRGN
NPYCPLSLPVINGDSDRLPFIGNHGFLGHSFGNQRRNITPNCNLDGRRRDFLHALILKQR
KTIAARPNLYSLHLDYLGNKSSTMEAARYCTNANKPLLQVSGLLPPLYYCSIIILAAETG
GSNGHQILKGFQIKYQAQVGDFHFFSSTYVHGRICLIQEIKMYSPPSTDPGRDEEQYFAI
GANLLASLDHTMDFNEPIVFPMHNVGQQEGVQLYSSTGDTQLSRNISAGKCLKGGKRKGS
GEDSSSIHSQAETGALSQREVSMEPEGADEKAGDADTSREDYVHVRAKRGQSTNSHSLAE
RFRREKINDRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVHFLSMKLSAISPEPN
CNLNLQDILCSQDARSAFPGYNPQMSNVHLNLYRASQQGFWRPESYGIIQNPANVHMART
AQFSEFPQQRGIIWDEELGNITPDAFTSDTGASSIDNSHSLKVE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcggttgcgatctatggaggcgcgcggcggcggcgccacggccgagacccac
cgcatagatctaccgcctacggccacgctcgccgacctgagggccctcctcgccgcgaag
ctcttcgcggcgcagcccgtccccgcggaatctgtccgcctctccctcaaccgctccgag
gagctcgtctcgcccgtccccaccgccacgctccccgctctcggtctcgcgtccggtgac
ctcgtcttcttcaccctctacccactcaagcccctcgcgccgccggctcaaaacctgccc
cggaaccttagcccgggctctgcttcgatcgcgaaggctgtcgaccgcggcaaatgtccg
gagcagcctggtactggaggctcctcgtcgctggcgcaagctgtagacgcgaaccctcgc
gtaccggccgcgtcctgtccgccggatgcggtgatggcggaggcggtcgatgccacaaag
ggctggtcgagttgcgtgcttagggatctcaagagggaggtggagaacgcgggtggcgct
gagggaaccgttgtcggtcgcctggtagcagccctacatgcagctctgtttgatgccggc
ttcctcacctcaaatccgatggggtctcacctctcgctgccgcgggactggccgtcaggt
gctttggagccactaaccatcaagtataccataccagagcttgtaacaatcttacctgtg
gctgaggaggggaaggtggcggtgctgaacttctccctgatagggaattttgtgatggta
tacgggtatgtgcctggggcacaatctgaggtgcgccggttgtgcttggagctgccaaag
cttgagcccttattgtatctggatagccatcgtctgagcgaagtgcaggagagggagatt
cttgagctgtggagagtgctgaaggatgagatgtgcctgccactgatgatatccttgtgc
caactgaacaatttggggttgccaccatgcttgatggctctgcctgttgatctcaagact
aaggtcttggagcttgttcctggggtggatcttgcaagggttgagtgcacgtgcaaggaa
atgaggaatcttgcagcagatgataatctttggaagaagtttgtagtgaagttcaaagat
catggagagggttctagagggagaatgagtgcgaaggcaaggtttgtggaaatttggact
gccaataagcggcggctgaagaggcccagtccaaccttttggaactatggccgggggaac
aatccatattgcccacttagtcttccagtgatcaatggggactcggacagactcccgttt
attgggaatcacggttttcttgggcatagttttggaaatcaacggaggaacatcacgccg
aactgcaatcttgatggtcgccgccgtgacttccttcatgcgctaatcctgaaacaaagg
aagacgattgcagcaagaccgaatctctattcccttcacttggattaccttgggaacaag
agtagtacgatggaagctgcacggtactgcacaaacgccaacaagcctcttctacaggtt
tccggactgcttccaccgctctactattgctcaataataattctggcagcagaaacaggt
ggtagcaatgggcaccagattctgaaaggttttcagatcaagtatcaggctcaggttggt
gacttccatttcttcagtagtacatatgttcatgggaggatctgtctaatacaagagata
aagatgtattcccctcccagcactgatcctggaagggacgaagagcagtacttcgcaatc
ggagctaacctgcttgcttcactagaccataccatggatttcaatgagcctatcgtcttt
ccgatgcacaatgtaggccagcaagagggggttcagctttacagttctaccggtgatact
cagctaagtagaaatatcagcgcggggaagtgtttaaagggtggtaaaaggaagggttct
ggagaggacagttcatcaatacattctcaagctgaaaccggtgcattgtctcagcgagaa
gtcagcatggagccggagggtgctgatgagaaggcaggtgatgctgataccagcagagag
gactacgtgcatgtccgagcaaagcgcggccaatccaccaatagccacagccttgcagaa
agatttcgaagggaaaagataaatgacaggatgaagcttcttcaagacctcgtcccgggt
tgcaacaagattacaggcaaggccatgatgcttgatgagatcataaactatgtgcaatct
ctgcagcggcaggttcatttcctttcaatgaagctctcagctatcagtcctgagccgaac
tgcaatctcaacctacaagatatcctttgctcacaagatgctcgctctgcctttccggga
tacaacccgcaaatgagcaatgtgcatcttaatctgtacagggcatctcaacaagggttc
tggcgtccagaatcatacgggatcatccaaaatccagcaaatgttcatatggctagaacg
gctcagttctctgaatttcctcagcaaagaggcatcatttgggacgaggagcttggaaac
attactccagatgctttcacttcagataccggtgccagtagcatagataattctcattca
ttgaaagtggaatga
DBGET
integrated database retrieval system