Phragmites australis (common reed): 133914937
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Entry
133914937 CDS
T10575
Name
(RefSeq) ABC transporter G family member 48 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133914937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133914937
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
133914937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
ABC2_membrane_3
MMR_HSR1
AAA_28
AAA_33
RsgA_GTPase
AAA_22
PDR_CDR
AAA_30
Ploopntkinase3
nSTAND3
RNA_helicase
NTPase_1
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
133914937
NCBI-ProteinID:
XP_062213878
LinkDB
All DBs
Position
4:182752..192301
Genome browser
AA seq
1449 aa
AA seq
DB search
MAAESNQHQHAAALASSSRRSLSWSSSISQSFRQMETEDPFGRAQAELEHRDEEENLRWA
ALEKLPTYDRMRRGIIRRELDGGGDGVEVVDIQKLAGGDGGRALLERLFQDDSERFLRRL
RDRVDMVGIELPTIEVRYEQLKVEADVVAAGRALPTLWNATTNFLQGLIGRFGSNKRTIT
ILKHVSGILKPSRMTLLLGPPSSGKSTLMRALTGKLDKNLKVSGSITYCGHPVSEFYPER
TSAFVSQYDVHNAEMTVRETLDFSRRCLGIGARYEMLAELARRERDAGIKPDPEIDAFMK
ATAVQGHETNIVTDATLKVLGLDICADIIIGDEMIRGISGGQKKRVTTGEMLTGPARALF
MDEISTGLDSSSTFQIVKFIRQLVHVMNETVMISLLQPPPETYNLFDDIILLSEGYIVYH
GPRENILEFFESAGFRCPERKGVADFLQEVTSKKDQQQYWYLDQEQYRYVSVPEFAERFR
SFHVGQQMLKELQIPFEKSKIHPAALTTRKYGLSSWESLKAVMSREQLLMKRNSFIYIFK
VTQLIILALMSMTVFLRTKMPHGQISDGTKFFGALTFSLITVMFNGFAELQLTVKKLPVF
YKHRDFLFFPAWTFGLANIILKVPVSLVEAAVWVVLTYYVMGFAPAAGRFFRQFIAFFAT
HQMAMALFRFLGAVLKTMVVANTFGMFVLLIVFIFGGFVIRKNDIKPWWIWGYWASPMMY
SQNAISINEFLASRWAIPNNDTTIDAPTVGKAILKSKGLFTGEWGFWLSIGALIGFIILF
NILYLLALTYLSPSSGSNTLVKERNEDEISQTECSDAAVSASVSPGTNGATNRLAQSRVT
LPFQPLSLCFNHVNYYVDMPVEMKEQGFTESRLQLLSDISGAFRPGVLTALVGVSGAGKT
TLMDVLAGRKTSGAIEGDITLSGYPKKQETFARISGYCEQTDIHSPNVTVYESIIYSAWL
RLSSDVDDIMRKMFVEEVMALVELNVLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSI
IFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLLKRGGQVI
YAGELGRHSHKLVEYFEAIPGVPKITEGYNPATWVLEVSSPLSEARLNINFAEVYSNSVL
YRKNQELIKELSIPPPDYQDLSFPTKYTQNFYGQCVANFWKQFRSYWKNPPYNAMRYLMT
LLFGLVFGTVFWQKGKNIDSQQDLYNLLGATYAATFFLGASNCITVQPIVSIERAVFYRE
KAAGMYSPLSYAFAQTCVEVIYNVLQGILYTVLIYAMIGYDWKADKFFYFLFFIIASFNY
FTLFGMMLVACTPSALLANILISFALPLWNLFAGFLVVRPAIPIWWRWYYWANPVSWTIY
GVVASQFGENGGSLSVPGGSSVLVKQFLKDNLGIRHDFLGYVVLVHFAYIIVFFFVFGYS
INFFNFQKR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagtcgaatcagcatcagcatgcggcggcgctggcgtcgtctagccgccgg
agcctgagctggagctcctccatctcgcagtcgttccggcagatggagacggaggacccc
ttcgggcgggcgcaggcggagctggagcaccgcgatgaggaggagaacctgcgctgggcg
gcgctcgagaagctgcccacctacgaccgcatgcgccgcggcatcatcaggagggagctc
gacggcggcggcgacggtgtcgaggtcgtcgacatccagaagctggccggcggcgacggc
ggccgcgccctcctggagcgactgttccaggacgacagcgagcgcttcctgcgccgcctc
agggaccgcgtagacatggtgggcatcgagctcccgacgatcgaggttcggtacgagcag
ctgaaagtggaggccgacgttgtcgccgccggccgcgccctccccacgctctggaacgcc
accaccaattttctccagggtctcattggacggtttggttcaaacaagaggaccattacc
atacttaagcatgtcagtggaatcctcaagccatccaggatgacgcttcttcttggacct
ccatcctcaggaaagagcacactcatgcgagcgctcactgggaagcttgacaaaaacctc
aaggtctctggcagcatcacatattgtggccacccagtttctgagttctaccctgagagg
acaagtgcgttcgttagtcaatacgatgtccacaatgcggagatgactgtaagagagacg
ttggatttctccaggcggtgcctaggcattggtgccagatatgagatgctcgcagaactc
gctagaagggagcgggacgcaggcattaagccagatcctgagattgatgctttcatgaaa
gctactgcagtacaaggacatgagactaatattgtaacagatgccactctcaaggtgctt
gggctggacatttgtgccgatattattattggtgatgagatgatcagaggaatttctggt
gggcaaaagaaacgtgtgacaactggggagatgttaacaggaccagcaagggctttgttc
atggacgaaatatccactggtctggatagctctagcacatttcagattgtaaagtttata
aggcaattggtccatgtgatgaatgagactgtcatgatctccctcctccagccaccgcca
gagacctacaatctttttgatgatataatcctgctatcagaaggatacatagtctaccat
gggccacgcgagaacatcttggaattcttcgagtctgctggtttccggtgccccgaaagg
aaaggtgtcgcggactttcttcaagaggtcacttccaagaaagaccagcagcagtactgg
taccttgatcaggagcagtatcgctatgtgtccgtcccggagtttgcagaacgtttcagg
tcattccatgtaggccagcagatgctcaaggagctgcaaattcctttcgaaaagtccaaa
atccatcctgccgcgttgactaccagaaagtatgggctctccagctgggagtcacttaag
gcagtgatgtcgagagagcagctgctgatgaagcgcaactccttcatctacattttcaag
gtcacccagttgatcatccttgcactcatgtccatgactgtgttcctcagaacgaagatg
ccccatggacagatttctgatggcaccaaattctttggggctctgacttttagtttaatc
acggtgatgttcaatgggtttgctgagctacaactgaccgtaaagaagctgcctgtgttc
tacaaacatagggatttcttgttcttccccgcatggacctttggactggcaaacataatc
ttaaaagttcctgtttcgcttgtggaagcagcagtatgggttgttctcacgtactatgtg
atgggctttgcacctgctgcaggaaggttctttcgtcagtttatagctttcttcgccaca
caccaaatggcgatggctttgttccgttttcttggtgctgttttgaaaacaatggttgtg
gccaatacttttgggatgtttgtgctgcttattgttttcatctttggaggatttgtcatc
cgtaaaaatgacatcaaaccatggtggatctggggttactgggcatctcctatgatgtat
agccaaaatgcgatatctatcaacgaattccttgccagtagatgggctattccaaataat
gacacgactattgatgcaccaacagtaggcaaagctattcttaaatccaaaggcttgttt
actggggagtggggattttggctttccatcggagcccttatcggattcattattttgttc
aacatcctttaccttttggcccttacgtacttgagtcccagtagtggctccaacactcta
gtgaaagagagaaatgaagacgaaatatcccaaactgaatgcagtgatgcagcagtcagt
gcgtctgtttctccaggtactaatggtgcaacaaacagactagctcagtcacgcgttact
ttgcctttccagcctctttcactttgtttcaaccatgtaaactattatgtggacatgcct
gtggaaatgaaggagcaaggattcacagaaagccgtttacagctgctctctgatatcagt
ggtgctttcaggccaggtgttctgacggcattagttggtgtgagtggagctggaaagacc
actttaatggatgtcctagcaggaaggaaaactagtggagctattgaaggagacatcacc
ctctccggttaccccaaaaagcaagaaacttttgcccggattagcggctattgtgaacag
acggatatccattctccaaatgttactgtatatgaatccattatctactccgcttggctg
cgtctttcttcagatgttgacgacattatgagaaagatgtttgtggaggaagtgatggcc
cttgtagagcttaatgtgttgcgcgatgctctggtgggtctccctggagttaatgggtta
tcaactgaacaaagaaaaaggctgacaattgccgtggagttggtagcgaacccttcaatc
atcttcatggacgagccaacttctggtcttgacgctcgagctgcagcaatcgtcatgcgt
acagtgagaaatacagttaatactgggcgtactgtggtttgcacaatccaccagcccagc
attgatatatttgagtcttttgatgagcttctacttttgaaacggggagggcaagttatt
tatgctggtgaacttggtcgtcactctcacaaattagtcgaatattttgaggcaatacca
ggtgttccaaagatcacagaagggtacaatcctgcgacatgggtgctagaagttagctcc
cctctatctgaggctcgactgaacataaattttgctgaagtttattctaattctgtgctt
tataggaaaaaccaagagcttattaaggagttaagtattcccccaccagactaccaggat
ctgtcatttcctactaaatatacgcagaatttctacggccaatgtgttgcaaacttttgg
aagcaattccgttcttattggaagaatccaccctacaatgccatgcgctatctgatgaca
ttgctctttggccttgtatttggcacagtattttggcaaaagggaaagaacatagattcg
caacaagatttgtacaatctacttggagccacatatgccgctaccttcttccttggggct
tccaattgcatcacagttcagcctattgtgtctattgagcgagcagttttctatcgcgaa
aaggcagcggggatgtactctcctttgtcctacgcatttgctcagacatgtgtggaggtc
atctacaacgtcctacaggggattctgtacacagtcctcatctatgccatgattggatac
gattggaaagctgataaattcttctatttcctgttcttcatcattgcgagcttcaactac
ttcacattgttcggtatgatgctggtagcatgcactccctctgcattgctcgcaaacatt
ctcatctcgtttgcactgcctctttggaacctgtttgctggattcctcgtcgttagaccg
gcaataccgatttggtggaggtggtactactgggctaacccagtctcgtggacaatctat
ggtgttgtcgcgtcacaatttggcgagaatggcggctcactttcagttcccggcgggagc
tctgtgctggtgaagcagttcttgaaggataatctcggcatccggcatgacttcctcggc
tatgttgtgctcgtccatttcgcctacatcatagtattcttcttcgtatttggttattcc
atcaacttcttcaacttccagaaacgttag
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