KEGG   Phragmites australis (common reed): 133914955
Entry
133914955         CDS       T10575                                 
Name
(RefSeq) protein EXPORTIN 1A-like
  KO
K14290  exportin-1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03008  Ribosome biogenesis in eukaryotes
paua03013  Nucleocytoplasmic transport
paua03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133914955
   03008 Ribosome biogenesis in eukaryotes
    133914955
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    133914955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133914955
   03009 Ribosome biogenesis [BR:paua03009]
    133914955
   03016 Transfer RNA biogenesis [BR:paua03016]
    133914955
   03036 Chromosome and associated proteins [BR:paua03036]
    133914955
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     133914955
Ribosome biogenesis [BR:paua03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    133914955
  Pre-60S particles
    133914955
Transfer RNA biogenesis [BR:paua03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    133914955
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     133914955
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N mTOR_dom
Other DBs
NCBI-GeneID: 133914955
NCBI-ProteinID: XP_062213910
LinkDB
Position
4:466543..480131
AA seq 1071 aa
MADKLRDLSQPIDVPLLDATVAAFYGTGSKDERIAADQILRDLQNNPDMWLQVVHILQNS
QNLNTKFFALQVLESVIKYRWNALPVEQRDGMKNYISDVIVQLSSNEVSFRQERLYVNKL
NIILVQVLKHEWPARWSSFIPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK
IKELKSSLNSEFRLIHELCLYVLSATQRSELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPVAAYRNLTLQCLTEVAALQFGDFYNLQYVKMYTIFMMQLQAILPPETIPDAYANG
SSEEQAFIQNLALFFTSFFKNHMRILEITPENRAALLLGLQYLIGISYVDDTEVFKVCLD
YWNVFVLELFEAHNQMEPAAAVSMMGLQAQMVPGIVDGTGTAVQQRRQLYSGSLSKLRML
MICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKK
LSKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAV
IASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKF
VTQQVGESEPFVSELLTNLATTIADLEPHQIHTFYESVGNMIQAESDNAKRDEYLKRLMS
LPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLT
VYRMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHMGKQFVPP
MMDPVLGDYARNVPDARESEVLSLYATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFE
DYPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLE
ILRNFQASGFQNQFYKTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPL
WDASSVPYQYTDNAMFVRDYTIKLLGTSFPNMMTAEVTKFVDGLLSSKHDLPSFKNHIRD
FLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggcggacaagctcagggatctgagccagcccatagacgtgccgctgctcgacgccacc
gtcgccgccttctatggcaccggatctaaggatgagaggattgccgctgatcagatactg
cgcgacctacaaaataatccagacatgtggctgcaagtcgtccacattcttcagaattct
cagaacttgaacaccaagttctttgccctgcaagtgcttgaaagtgttatcaagtacagg
tggaatgcgctgcctgttgaacaacgtgatggcatgaagaattacatatccgatgttatt
gtgcagctttccagcaatgaagtttcctttcgacaagagaggctatatgttaataaactc
aatattatattggtgcaggtcctgaaacatgagtggcctgccagatggtcatccttcatc
cctgatcttgttgcagctgcaaagagtagtgaaacaatatgtgaaaattgcatggcaata
ttgaagcttctaagtgaagaaatttttgacttttcaagaggtgaaatgacacaacaaaag
attaaagaactgaagtcttcacttaacagtgagtttcggctcattcatgagctatgttta
tatgtcctatctgcaacacaaagatctgagctcatccgtgctactttggcgacacttcat
gctttcttatcatggatccctgttggattcatctttgagtcaccgttgctggagacattg
ctgaagttcttccctgtggctgcttatcggaatcttacacttcagtgcctaacggaggtt
gctgctcttcagttcggtgatttttataatctgcaatatgtgaagatgtatacaattttc
atgatgcagctgcaggctattcttcctcctgaaacaatcccagatgcctatgctaatggt
tccagcgaagaacaggcatttatacaaaatcttgcactcttcttcacgtctttctttaag
aatcacatgcgtatactggaaataactccagaaaatagagctgctttacttctgggtctt
cagtaccttattggaatttcatatgttgatgatacagaggtttttaaggtctgcttggat
tactggaatgtgtttgttttagagctatttgaagcacacaatcaaatggaacctgcagca
gctgtaagcatgatgggacttcaggctcagatggttcctggaatagtagatgggaccggc
acagctgttcaacaaaggaggcagctttactcgggttcactctcaaaactaaggatgttg
atgatatgtcggatggcaaagcctgaggaagtattgattgttgaagacgaaaatggcaat
attgtacgggagacaatgaaagacaatgatgttcttgttcagtacaagatcatgagggag
acactaatctatctgtctcatcttgatcacgaggatacagagcaacagatgttaaagaaa
ctgagcaagcaattaaatggagaagactggagttggaataacctcaatactctttgctgg
gctattggatcgatatcaggttctatggtagaggagcaggagaatagattcttggttatg
gttattcgtgatttgctaaacctctgtgaaatcacaaagggaaaagataataaagctgtc
attgcaagtaacatcatgtatgttgttggtcagtatcctagatttctcagggctcattgg
aagtttttaaaaactgtggtcaacaaattgtttgagttcatgcatgagatgcatcctgga
gttcaggatatggcatgtgatactttcctgaagattgtccaaaaatgcaagcgcaagttt
gtgacacagcaggtgggcgagagtgaaccatttgtttctgaacttctgaccaaccttgct
acaacaattgctgatctggagccacatcagattcatacgttttacgaatcagttggcaac
atgattcaagccgaatctgataatgctaagagggatgaatacctcaagagattgatgagc
cttcctaatcagaaatgggctgaaataattggacaggcaagccaaagcattgatatcctg
aagaaccaagatgttatcagatcagtcctcaacattttacagacaaacacaagtgttgcg
agctcccttggaccacactttttcccacaaatttcgctaattttcctggacatgctgaca
gtctacagaatgtacagcgagcttgtatcaagcactattgctgaagggggaccctttgcc
tcaaggacatcatttgtaaaactcctgagatctgtcaagagggaaaccctgaaattgatc
gagacttttgtggacaaggcagaagatttaccacatatggggaagcagtttgttcctcca
atgatggatcctgtccttggtgattatgctagaaatgtgcctgatgcaagggaatctgaa
gttctgtcgctgtacgcgacaatcattaacaagtacaaaggtgaaatgcttgaggacgtg
cctcgtatatttgaggctgtttttcagtgcactcttgagatgattactaagaacttcgaa
gattatcctgagcaccgccttaaatttttttctttgctccgtgcaattggcacccattgc
ttccaagcattaattcagctttctagtcagcaattgaagcttgtgattgattcgattaat
tgggcatttagacatacggagagaaatattgccgagactggccttagtctattgttggaa
attttgaggaactttcaggcttcaggattccaaaatcaattctacaaaacctactttttg
acaattgagcaagagatttttgcagttctcacggacactttccacaaacctggtttcaag
cttcatgtgttggtgctacaacacttgttttgtgtggttgatgggctaactgagcctctc
tgggatgcctcctcagtaccatatcaatatactgataatgctatgtttgttcgagattac
actattaaacttttggggacgtcatttcctaacatgatgacagctgaggtgaccaagttt
gttgatggccttcttagttcaaagcatgatcttccgagcttcaaaaaccatataagagac
ttcctggtgcagtcgaaggagttctcagctcaggataacaaggatctatatgccgaagag
gctgctgcgcaaagagaaagggaacgccaacggatgcttgccatcccggggctcattgcc
cctagtgaattgcaagatgagatggtagattcatag

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