Phragmites australis (common reed): 133914955
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Entry
133914955 CDS
T10575
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
paua03013
Nucleocytoplasmic transport
paua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133914955
03008 Ribosome biogenesis in eukaryotes
133914955
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133914955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133914955
03009 Ribosome biogenesis [BR:
paua03009
]
133914955
03016 Transfer RNA biogenesis [BR:
paua03016
]
133914955
03036 Chromosome and associated proteins [BR:
paua03036
]
133914955
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133914955
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133914955
Pre-60S particles
133914955
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133914955
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133914955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
133914955
NCBI-ProteinID:
XP_062213910
LinkDB
All DBs
Position
4:466543..480131
Genome browser
AA seq
1071 aa
AA seq
DB search
MADKLRDLSQPIDVPLLDATVAAFYGTGSKDERIAADQILRDLQNNPDMWLQVVHILQNS
QNLNTKFFALQVLESVIKYRWNALPVEQRDGMKNYISDVIVQLSSNEVSFRQERLYVNKL
NIILVQVLKHEWPARWSSFIPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK
IKELKSSLNSEFRLIHELCLYVLSATQRSELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPVAAYRNLTLQCLTEVAALQFGDFYNLQYVKMYTIFMMQLQAILPPETIPDAYANG
SSEEQAFIQNLALFFTSFFKNHMRILEITPENRAALLLGLQYLIGISYVDDTEVFKVCLD
YWNVFVLELFEAHNQMEPAAAVSMMGLQAQMVPGIVDGTGTAVQQRRQLYSGSLSKLRML
MICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKK
LSKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAV
IASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKF
VTQQVGESEPFVSELLTNLATTIADLEPHQIHTFYESVGNMIQAESDNAKRDEYLKRLMS
LPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLT
VYRMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHMGKQFVPP
MMDPVLGDYARNVPDARESEVLSLYATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFE
DYPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLE
ILRNFQASGFQNQFYKTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPL
WDASSVPYQYTDNAMFVRDYTIKLLGTSFPNMMTAEVTKFVDGLLSSKHDLPSFKNHIRD
FLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagctcagggatctgagccagcccatagacgtgccgctgctcgacgccacc
gtcgccgccttctatggcaccggatctaaggatgagaggattgccgctgatcagatactg
cgcgacctacaaaataatccagacatgtggctgcaagtcgtccacattcttcagaattct
cagaacttgaacaccaagttctttgccctgcaagtgcttgaaagtgttatcaagtacagg
tggaatgcgctgcctgttgaacaacgtgatggcatgaagaattacatatccgatgttatt
gtgcagctttccagcaatgaagtttcctttcgacaagagaggctatatgttaataaactc
aatattatattggtgcaggtcctgaaacatgagtggcctgccagatggtcatccttcatc
cctgatcttgttgcagctgcaaagagtagtgaaacaatatgtgaaaattgcatggcaata
ttgaagcttctaagtgaagaaatttttgacttttcaagaggtgaaatgacacaacaaaag
attaaagaactgaagtcttcacttaacagtgagtttcggctcattcatgagctatgttta
tatgtcctatctgcaacacaaagatctgagctcatccgtgctactttggcgacacttcat
gctttcttatcatggatccctgttggattcatctttgagtcaccgttgctggagacattg
ctgaagttcttccctgtggctgcttatcggaatcttacacttcagtgcctaacggaggtt
gctgctcttcagttcggtgatttttataatctgcaatatgtgaagatgtatacaattttc
atgatgcagctgcaggctattcttcctcctgaaacaatcccagatgcctatgctaatggt
tccagcgaagaacaggcatttatacaaaatcttgcactcttcttcacgtctttctttaag
aatcacatgcgtatactggaaataactccagaaaatagagctgctttacttctgggtctt
cagtaccttattggaatttcatatgttgatgatacagaggtttttaaggtctgcttggat
tactggaatgtgtttgttttagagctatttgaagcacacaatcaaatggaacctgcagca
gctgtaagcatgatgggacttcaggctcagatggttcctggaatagtagatgggaccggc
acagctgttcaacaaaggaggcagctttactcgggttcactctcaaaactaaggatgttg
atgatatgtcggatggcaaagcctgaggaagtattgattgttgaagacgaaaatggcaat
attgtacgggagacaatgaaagacaatgatgttcttgttcagtacaagatcatgagggag
acactaatctatctgtctcatcttgatcacgaggatacagagcaacagatgttaaagaaa
ctgagcaagcaattaaatggagaagactggagttggaataacctcaatactctttgctgg
gctattggatcgatatcaggttctatggtagaggagcaggagaatagattcttggttatg
gttattcgtgatttgctaaacctctgtgaaatcacaaagggaaaagataataaagctgtc
attgcaagtaacatcatgtatgttgttggtcagtatcctagatttctcagggctcattgg
aagtttttaaaaactgtggtcaacaaattgtttgagttcatgcatgagatgcatcctgga
gttcaggatatggcatgtgatactttcctgaagattgtccaaaaatgcaagcgcaagttt
gtgacacagcaggtgggcgagagtgaaccatttgtttctgaacttctgaccaaccttgct
acaacaattgctgatctggagccacatcagattcatacgttttacgaatcagttggcaac
atgattcaagccgaatctgataatgctaagagggatgaatacctcaagagattgatgagc
cttcctaatcagaaatgggctgaaataattggacaggcaagccaaagcattgatatcctg
aagaaccaagatgttatcagatcagtcctcaacattttacagacaaacacaagtgttgcg
agctcccttggaccacactttttcccacaaatttcgctaattttcctggacatgctgaca
gtctacagaatgtacagcgagcttgtatcaagcactattgctgaagggggaccctttgcc
tcaaggacatcatttgtaaaactcctgagatctgtcaagagggaaaccctgaaattgatc
gagacttttgtggacaaggcagaagatttaccacatatggggaagcagtttgttcctcca
atgatggatcctgtccttggtgattatgctagaaatgtgcctgatgcaagggaatctgaa
gttctgtcgctgtacgcgacaatcattaacaagtacaaaggtgaaatgcttgaggacgtg
cctcgtatatttgaggctgtttttcagtgcactcttgagatgattactaagaacttcgaa
gattatcctgagcaccgccttaaatttttttctttgctccgtgcaattggcacccattgc
ttccaagcattaattcagctttctagtcagcaattgaagcttgtgattgattcgattaat
tgggcatttagacatacggagagaaatattgccgagactggccttagtctattgttggaa
attttgaggaactttcaggcttcaggattccaaaatcaattctacaaaacctactttttg
acaattgagcaagagatttttgcagttctcacggacactttccacaaacctggtttcaag
cttcatgtgttggtgctacaacacttgttttgtgtggttgatgggctaactgagcctctc
tgggatgcctcctcagtaccatatcaatatactgataatgctatgtttgttcgagattac
actattaaacttttggggacgtcatttcctaacatgatgacagctgaggtgaccaagttt
gttgatggccttcttagttcaaagcatgatcttccgagcttcaaaaaccatataagagac
ttcctggtgcagtcgaaggagttctcagctcaggataacaaggatctatatgccgaagag
gctgctgcgcaaagagaaagggaacgccaacggatgcttgccatcccggggctcattgcc
cctagtgaattgcaagatgagatggtagattcatag
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integrated database retrieval system