KEGG   Phragmites australis (common reed): 133915094
Entry
133915094         CDS       T10575                                 
Name
(RefSeq) flap endonuclease 1-B-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03030  DNA replication
paua03410  Base excision repair
paua03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    133915094
   03410 Base excision repair
    133915094
   03450 Non-homologous end-joining
    133915094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paua03032]
    133915094
   03400 DNA repair and recombination proteins [BR:paua03400]
    133915094
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133915094
DNA replication proteins [BR:paua03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    133915094
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     133915094
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     133915094
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133915094
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc US22 Hydrolase
Other DBs
NCBI-GeneID: 133915094
NCBI-ProteinID: XP_062214089
LinkDB
Position
4:1732408..1738598
AA seq 411 aa
MGIRGLTKLLAEHAPSAAVQRRVEDYRGRVIAVDASLSIYQFLIVVGRKGTELLTNEAGE
VTSHLQGMLNRTVRFLEAGIKPVFVFDGEPPEMKKKELAKRSSKRAAAAEELNRAMEVRD
EDLVEKFSKRTVKVTKKHNDDCKRLLRLMGVPVVEAPCEAEAQCAALCENHMVYAVASED
MDSLTFGARRFLRHLTDRGFKRCPVTEFEVSKVLEELGLTMDQFIDLCILSGCDYCENIR
GIGGQRALKLIRQHGCIEEVLQNLNQKRYIVPEDWPYQEVRTLFKEPNVCTEIPDFMWTS
PDSEGLMNFLSTENSFSPDRVAKAVENIKAARDRFCPGRLKLLTPVASLPGSVTEKEPKC
IPSSLGQSLKVRSALQVCKSSSSGFRYGSSKPFMLGRQSGFRQIPHAFSFI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgggaatcaggggcttgacgaagctgctggcggagcacgcgccgagtgccgcggtgcag
cggagggtggaggactaccgcggccgtgtcatcgccgttgacgccagcctcagcatctac
cagttcctcatcgtggttggaaggaaaggaacagaacttctgaccaatgaggctggtgaa
gtcacgagtcatctgcagggtatgttgaaccggacagtaagatttctagaagcagggata
aagcctgtatttgtgtttgatggtgagccacctgaaatgaagaaaaaggagcttgcaaaa
aggtcctcaaagagggctgctgctgccgaagagctaaatagagctatggaggttagggat
gaggatttagttgaaaaatttagcaaaaggactgtcaaggtcacaaaaaaacacaatgat
gactgtaagaggctgttaaggctgatgggtgtccctgtagttgaggcaccatgtgaggca
gaggcacagtgtgcagcactttgtgaaaatcacatggtctatgccgtcgcttcagaggac
atggactcactgacttttggtgctcgaaggtttcttcgtcacttaactgaccgtggtttt
aagaggtgtcctgtaacagaatttgaagtgtcgaaggttttggaagaacttggactcaca
atggatcagtttattgacttatgtatccttagtggatgtgactactgcgagaatattaga
ggtattgggggacaaagagccttaaaactcattcgtcagcatggttgtatagaagaagtt
ctgcaaaatcttaaccaaaagagatacattgttccagaagactggccctaccaggaagtt
cggaccttgtttaaggaacctaatgtttgtacagaaattccagatttcatgtggacctca
ccagactcggagggccttatgaatttcttgtcaaccgaaaacagtttcagtcctgatcga
gtagcaaaggcggtagaaaatataaaggctgccagggatagattctgcccagggagattg
aagcttttgacaccagttgctagcttaccgggatctgttacagagaaggaacccaaatgc
ataccaagttccctaggacaaagtttgaaggtcaggtctgctctacaagtatgcaagagc
tcaagctctggtttcagatatggtagctcaaagccatttatgctgggcaggcaatcagga
tttcgtcagatacctcatgctttctctttcatctaa

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