Phragmites australis (common reed): 133915162
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Entry
133915162 CDS
T10575
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133915162
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133915162
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
133915162
NCBI-ProteinID:
XP_062214200
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Position
4:2365985..2368478
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AA seq
368 aa
AA seq
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MERELLETFEAAKKAADAAAGEDDSPEADRCLDALRRLRAIHVNTDVLVSTQVGKRLRYL
TKHPHSGIQEVATDLFGYWKKVVLEETGKKNGTSENERSNNSSARAEKAQPMKVEKNSAS
ASAKVEKRDMDVRGLKPDTVKVDKVASNDSKAQSVKVERVSKEVSRTPDTKKPSSVRSGP
PKLTSLVKCNDATRDKIRELLAEAFSKVSGETSDDDREEVRNMLDEVDACDPFRVAVTVE
SALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLIGQVRPERLPDISPEEMASDAR
KLENKQIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVN
CNNHWKFC
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagctactggagacgttcgaggcggccaagaaggcggccgacgcggcggcc
ggggaggacgactcgccagaggccgaccggtgcctcgatgcgctgcggcggctgcgcgcc
atccacgtcaacaccgacgtcctcgtctccacgcaggttggcaaacgtcttcggtacctt
actaagcaccctcactcaggcatacaggaagtggcgacagacctttttgggtactggaaa
aaggttgttcttgaagagacaggaaagaaaaatggtacctcagagaatgaaagatcaaat
aactcttcagcaagggctgagaaggctcagcccatgaaggttgaaaagaactctgcatca
gcaagtgcgaaggttgagaaaagagacatggatgttaggggtctgaagcctgatactgtc
aaagttgataaggttgctagtaatgattccaaagctcaatctgtgaaggttgagagagtt
tccaaagaagttagtagaactcctgatacaaagaagccatcttctgtccgcagtggaccc
cctaagctgacatcccttgtcaaatgcaatgatgctacccgagataaaatccgggaacta
cttgctgaagccttctcaaaggtttctggagagactagtgatgacgaccgagaggaagtg
agaaacatgttagatgaagtagacgcatgcgacccattcagagttgctgtgacagtggag
tctgcgttatttgagaggcttggacgttccaccggggctcacaaggcaaaatacaggtca
ataatgttcaacctgagggccgataacaacactgatttccggagaagggttctcatcggt
caagtgaggcctgaaaggcttccggacatatcccccgaagagatggccagtgatgcaagg
aagcttgagaataagcagatcaaggagaaggctctgtttgattgtgagcgtggaggagca
ccaaaggcaacgaccgatcagttcaagtgtggcagatgtggccagcggaaaacgacttac
tatcagctccagactcggagtgctgatgaaccgatgacgacatttgtgacatgcgtaaac
tgcaacaatcactggaagttctgctga
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