KEGG   Phragmites australis (common reed): 133915172
Entry
133915172         CDS       T10575                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133915172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133915172
Spliceosome [BR:paua03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133915172
 Complex B
    133915172
 Complex C
   U2 SnRNP specific factors
    133915172
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_MUD2_C RRM_7 RRM_ACIN1 DUF8400 RRM_10
Other DBs
NCBI-GeneID: 133915172
NCBI-ProteinID: XP_062214215
LinkDB
Position
4:complement(2488642..2489290)
AA seq 130 aa
MAAVNLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA
YVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDIKKKEDEITRLQEKYGLG
SKTPGPGSSD
NT seq 393 nt   +upstreamnt  +downstreamnt
atggcggcggtgaacctacggaaggggaacgcgcgtctcccgccggaggtgaaccgtgtg
ctgtacgtgcggaacctgccgttcaacatctcgagcgaggagatgtacgacatcttcggc
aagtacggcgcgatccggcagatccggctgggcaacgccaaggacacgcgcggcaccgcc
tacgtcgtctacgaggacatctacgacgccaagaacgccgtcgaccacctctccgggttc
aacgtcgccaaccgatacctcatcgtgctctactaccagcccgccaagatgtccaagaag
tccgacatcaagaagaaggaggacgagatcacaaggctccaggagaagtacggactcggc
tccaagaccccaggccccggctccagcgactga

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