Phragmites australis (common reed): 133915233
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Entry
133915233 CDS
T10575
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
paua Phragmites australis (common reed)
Pathway
paua04144
Endocytosis
Brite
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
133915233
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133915233
NCBI-ProteinID:
XP_062214296
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Position
4:complement(3065235..3076659)
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AA seq
802 aa
AA seq
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MAAASAAVRMLPDGGADDEERWLAEGIAGVQQNAFYMHRALDSNNLKDALKYSAQMLSEL
RTSRLSPHKYYELYMRAFDEMRKLEMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLC
TVGSVYIKSKEAPVKDVLKDLVEMCRGIQQPLHGLFLRSYLSQISRDKLPDIGSEYEGDA
ESINDAVEFVLQNFIEMNKLWVRMQHQGPVREKEKRGKERNELRDLVGKNLHVLSQIEGV
DLDMYKETVLPRILEQVVNCKDDLAQFYLMDCIIQVFPDEYHLQTLETLSSAFPQLQPNV
DIKTVLSQLMDRLSNHAASSPEVLPEFLQVEAFAKFSNAIGKVIEAQPDMSVVGTVTLYV
SLLTFTLRVHPDRLDYVDQVLGACVKILSGKAKLEDSRATKQIVALLSAPLEKYSNIVTA
LELSNYPRVMDYLDNATTKVMALVIIQSIMKNTTCISTSDKIEALFVLIKGLIKDMDGAQ
DDELDEEDFKEEQNSVARLIHMLHNDDHEEMLKILCTVQKHILLGGPERLTFTVPSLVFS
ALKLVRRLQGQDGDVIGEDVPATPKKIFQILHQTIEALSCVPSPELALRLYLQCAEAAND
CDLEPVAYEFFTQAFILYEEEIADSKAQITAIHLIIGTLQRVNIFGVENRDTLTHKTTGY
SAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAAQLMSNAARGSS
GSVTLFIEILNKYLYFFEKGIPQITNTVIQDLIELIRTEKQSDNTVADPSAEAFFASTLR
YIEFQKQKGGSIGEKYEQIKTA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcatcggcggctgtgaggatgctccccgacggcggcgccgacgacgaggag
cggtggctcgccgagggcatcgccggcgtccagcagaacgccttctacatgcaccgcgcc
ctcgattcgaacaacctcaaggacgcgctcaagtactcggcgcagatgctctccgagctg
cgcacctcacggctctcgccgcacaagtactacgagctctatatgagggcgtttgatgag
atgcggaagctggagatgttcttcagggaggagacccggcgcggcagctgctccgtcgtc
gatctgtacgagcttgtgcagcatgctggcaacgtcttgccgagactctatctcctgtgc
acagtaggatctgtgtacattaaatcaaaggaggcccctgttaaagatgttcttaaagat
ctcgtcgaaatgtgtcgaggcattcaacaacctcttcatgggcttttcctaagaagttac
ctttctcaaataagccgagacaaactgcctgatattggttctgagtacgaaggggatgct
gaaagcattaatgatgcagttgaatttgttcttcagaatttcattgaaatgaacaaactc
tgggtccggatgcagcatcaggggcctgtgcgggagaaggaaaagcgggggaaggaaagg
aatgaattgcgtgatctggtaggcaaaaaccttcatgttctaagccagattgagggtgtt
gatcttgatatgtacaaagaaactgttcttccaaggatattagaacaggtggttaactgt
aaggatgaccttgcacaattctacctgatggactgcataatccaagtctttccagacgaa
taccatttacagacattggaaacattatcgagtgcatttccccagctacagccaaatgtt
gatatcaaaacagtgctctctcaacttatggacagattgtcaaaccatgctgcctcaagt
cctgaagtattgccagagttcttgcaagttgaagcttttgcgaaattcagcaatgccatt
ggaaaggtgatagaagcccaacctgacatgtcggttgttggaacagtaactctatatgta
tcacttctgacatttactctccgtgtgcatccagatcggcttgattatgttgaccaagtg
ctgggtgcatgtgtcaagatactttcaggcaaggcaaaacttgaagatagcagggcaaca
aagcaaattgttgcacttcttagtgctcccctggaaaaatatagcaatattgttactgca
ttagaactttcaaactatcctcgggttatggactatctagataatgctacaaccaaagtg
atggctttggtaataattcaaagcataatgaagaacacgacttgcatatctacttctgat
aagattgaggcactattcgttttaattaaggggcttatcaaagacatggatggggctcaa
gatgatgagcttgatgaagaggattttaaggaggaacagaattccgtagcacgtcttatt
cacatgctgcacaatgatgatcatgaggagatgctgaagatcttatgtactgttcagaag
catatacttctgggaggtcccgagcgtctaactttcactgtgccttcattagtattctct
gctcttaagttggtcagacgattacaaggtcaagatggagatgtcattggggaggatgtt
cctgcaactcctaagaaaatattccagatcttgcatcagactattgaagcactttcttgt
gtcccttccccagaattagctctgagactatatctgcagtgtgcagaggctgccaatgat
tgtgatttggaaccggttgcttatgagttctttactcaagcattcatactatatgaagaa
gaaattgcggattcgaaggctcaaataactgcaattcacctaataattggaacccttcag
cgggtgaatatatttggggtggaaaatagagataccctcactcataagacaacagggtac
tcagcaaagcttctgaagaagcccgatcaatgccgagcagtctatgcatgttctcatctt
ttctggaccgatgaccaagatggaataatggatggtgaaagggtcctcctttgtttaaag
cgtgccttgagaattgcaaatgctgctcaactgatgtctaacgcggccaggggaagcagt
ggatctgttactctatttatcgaaattttgaacaagtacttgtacttctttgagaaagga
attccacagatcacaaatactgtgatccaagatttgattgaattaattaggactgagaag
caaagtgacaatactgtagctgatccatccgcagaggccttctttgccagcactttacgg
tacattgaatttcagaagcagaaaggtggaagcataggcgaaaagtatgagcaaataaag
acagcatga
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