Phragmites australis (common reed): 133915253
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Entry
133915253 CDS
T10575
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
paua04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133915253
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133915253
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133915253
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133915253
03036 Chromosome and associated proteins [BR:
paua03036
]
133915253
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133915253
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133915253
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133915253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Me-amine-dh_H
ComGF
Motif
Other DBs
NCBI-GeneID:
133915253
NCBI-ProteinID:
XP_062214329
LinkDB
All DBs
Position
1:31561453..31570127
Genome browser
AA seq
509 aa
AA seq
DB search
MNGATAPERSPSASPPTQAPSFSPPPPTQPLEWRFSQVFGERSAGEEVQDVDIISAIEFN
KSGHHLATGDRGGRVVLFERTDVKDHTCRKEAEISDYSISRHPEFRYKTEFQSHEPEFDY
LKSLEIEEKINKIKWCQAANGALFLLSTNDKTIKFWKVQEKKVKKVSEMNLDRSTAPANG
NPCGVGCPSASLSNGNVSKSGGLTLLRLPVVVTSQETSLVASCRRVYAHAHDYHINSISN
NSDGETFISADDLRINLWNLEISNQSFNIIDVKPTNMEDLTEVITSAEFHPTHCNTLAYS
SSKGSIRLVDLRQSALCDTHSQIFEQHEAPGSRSFFTEIIASISDIKFSKDGRHILSRDY
MTLKLWDVKMNSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCQGGDGLRVATGSYSNI
FRVFGCGTGSNEATTLEATRNPTRRQLQNPTRAARSLSTLTRAVRRESTGIDANGNSHDL
STKLLHLAWHPTENLIACAAANSLYMYYA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccacggcacccgagcgctcgccctcagcctcgcccccgacccaggcgccg
tcgttctcgccgcctcccccgacgcagccgctcgagtggaggttctcccaggtgttcggt
gagcgtagcgccggcgaggaggtccaggatgttgacatcatctcagcaatagagttcaat
aaatcaggacaccatcttgccaccggggacagaggtggacgagttgttttgtttgaaagg
acagatgtcaaagatcacacctgtagaaaagaggctgagatatctgattattctatcagc
aggcatcctgaatttcgctacaaaactgagtttcaaagccatgaaccagagtttgattac
cttaagagcttggaaattgaagagaagattaacaaaataaagtggtgccaagcagcaaat
ggcgcattgtttcttctgtccacaaatgacaaaacaataaagttttggaaggtgcaagaa
aagaaagtaaaaaaagtatctgagatgaatttggaccgttcaactgctcctgcaaatggt
aatccttgtggtgtgggctgtccgagtgcatctctctcaaatggcaatgtttcaaaatct
ggtggacttactttgcttcgcctgcctgtggtagttacaagccaagaaacaagtcttgtc
gcgagttgccgaagagtatatgctcatgcacatgactaccatattaactccatctcaaat
aacagtgacggtgagacgtttatatcagcagatgatctgcggataaatctttggaatttg
gaaattagcaatcaaagtttcaatattattgatgttaagcctacgaacatggaggatctc
actgaggtgataacatctgctgaattccaccctactcattgcaatacattggcttatagt
agctcaaagggctccattcgacttgttgatctgcgacaatctgccctttgcgatactcat
tcccaaatctttgagcagcatgaggccccaggttcaagatcatttttcactgagattata
gcctcaatttcagacataaagttttccaaggatgggcgacatattctcagtcgcgactac
atgactctgaagctttgggatgttaagatgaattctggtccagttgcgacattccaggtt
catgagtatctaaggcctaagttatgtgatttatatgaaaatgactcaatttttgacaaa
tttgagtgctgtcaaggtggagatggattacgagtagcaactggttcttacagcaacatt
ttccgtgtgtttggttgtggtactggtagcaatgaggcaacaacactcgaagcaactcga
aaccctacaaggaggcagctccagaatcccacaagggctgccagatctttaagtactctg
acaagggctgttagacgagaaagcactggaatagatgccaatggaaattcccatgatctg
agcacaaaattgctccatttggcttggcacccaactgaaaatttaatcgcctgtgctgca
gccaacagcttgtacatgtactatgcataa
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