Phragmites australis (common reed): 133915291
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Entry
133915291 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133915291 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133915291
Membrane trafficking [BR:
paua04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
133915291
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
133915291
NCBI-ProteinID:
XP_062214380
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Position
4:complement(3887198..3902232)
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AA seq
1281 aa
AA seq
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MDPLRSYLGRLLLEEITPVVTVLTTPLAEAACRKSGLSFVDMLSPFSLFKKIDVPVRTAS
DQPYRLQMFKIRMVYASDVRKQDYEVADERIKLVISEANEKALPDLLADPPQLEDVLGKP
EAELCPLWIKKFNRELMQTLSFSEHETFDHPVACLLVVSSMDKEPISKFVDLLNTNQLPS
LLNEGIMDPQILKHYLVLHDQQDGPQEIAANVLAEMQSTLGLNYCKLLCINSSTEAGGSN
ADDSWLPYKALGLNNHEGACFLNMDDLNEIKDFMQDFASNHIIPYMEQKIRVLNQQVATT
RKGFRNQIKNLWWRKKDDVPEAPNGPMYTFTSIESQIRVLGDFAFMLRDYELALSNYRLL
STDYKLDKAWKRFAGVQEMSGLCYFMLDQSRKDAEYCMENAFNTYLRIGSSGQRNATRCG
LWWAEMLKTRGQYREASTVYFRISNEEPSLHSAVLLEQAACCYLLSSPPMLRKYGFHLIL
AGNSYYMSDQKQHAVRAYRNALFVYKQYPWSYINDHVHFNVGRWYGVLGIFDVAIKHLLE
VIACSHQSLTMQNVFLNDFFHFVQSMGKKFGVHKLQLPVFNMSSLRVIYEDHRTYASDAD
VDVSESIWQELEEEMIPSSSIVRTNWLDDQPKSSALRKYKGSCVCVAGEAVKLNVELKNP
LQISVAVSGISLICQLSTTLDALSSEVSVLTMDAVEDKANTEPSVSIFETDENNFTVSKL
DIVLGGGEIKRVQLDVTPKVEGILKLVGIRWTLSDSVVGYQYFESDTRKKNKKGKKGPRR
SLNNSLIVIKGLPKLTGYIDHMPTRAFAGDLQLLTLNLRNHSDYAVKGIKMKISNPRFVI
PGDSSDINLKFPRCLRKHAQSESNDVLPIITKEKFRGLLFAFPQDIEIQGGATLSWPIWF
HAATPGNVSLYISLYYEIEGSSDITYRTLRMHYNLEVVQSLEVSFAISMCSSKLQEYIVR
MDVINRTPSESFVLHQLSCVGSKWAVSALPSCNSISSVETVFANQAVSCFFEIKDFGTGS
CKEAESSSYRCDIALCPGSSTDVFDIARSPLADFHYQERCRQGKLPKGPCSLLDFVLISK
AVAGNSSKSVQDLQLLSHHTCHCSALSRSPIWWLMEGPRTVSHDFSKSYCEVNIQLVIHN
SAGHKIWVRVVTFDGMPEKSQTVHPQDSTSALGGWYDVSPENDIKAISSAKGTHFQKQST
ESISPYVWCSLSSAQIDLQPDSSARVPLKVCIFAPGTYNFSNYELHWKVHPSEGAQMDEN
DRLSSGGDQGHPFYATVLQSA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctcaggagctacctggggcggctcctcctcgaggagatcaccccggtggtg
acggtgctgaccaccccgctcgccgaggccgcctgccgcaagagcggcctgagcttcgtc
gacatgctctcacctttctcgctcttcaagaaaatcgacgtgcccgtgcggacggcgagt
gatcagccgtacaggttgcagatgtttaagattcgaatggtttacgcgtcagacgtccgg
aagcaggactacgaggtggcagatgagaggattaagctggtgatttccgaggccaatgag
aaggctcttccggatttgcttgcagacccaccacagcttgaagatgtacttggcaagcct
gaagctgagctgtgcccattgtggattaagaagttcaatagagagctaatgcaaacactc
tcattttcggagcatgaaacgtttgaccatcctgtggcatgtcttctagttgtgtcgtca
atggacaaagaaccaatcagcaaatttgttgatctcttgaacacaaatcagttaccttct
cttttaaatgaaggtataatggatccacaaattctgaagcattatctcgtactacatgac
caacaagatgggccacaagagatagctgcgaacgtcttagcggaaatgcagagcaccctt
ggtttgaattattgtaaattattatgtataaattcttctacagaggcaggtggtagtaat
gctgatgattcgtggttaccttataaagctcttggtttaaacaaccatgaaggggcctgt
ttccttaacatggatgatttgaatgagataaaggacttcatgcaagattttgcttctaat
catatcatcccctacatggagcaaaagattcgcgtcctcaatcagcaggtagccacgaca
agaaagggttttagaaatcaaataaagaacttgtggtggagaaagaaagatgatgtccca
gaagcaccaaatgggccaatgtatacattcacctccatagaatcgcagattagagttctg
ggtgattttgctttcatgttacgggactacgagcttgctttgtccaattacagattactc
tccacagattataagcttgataaagcttggaagcgatttgctggtgtacaggagatgagt
ggactctgctatttcatgttggatcagtcaaggaaggacgcagaatattgcatggaaaat
gcattcaatacatatctgagaattggatcttctgggcagagaaatgctactagatgtggc
ctttggtgggcagaaatgcttaaaacaagaggacagtatagggaggcatcaactgtctat
ttccgcatttctaatgaggaaccttccttgcattccgctgtactgcttgagcaagccgct
tgttgctatttgttgtccagtccacctatgcttcggaagtacggatttcacctaatctta
gctgggaatagttactacatgtctgatcagaaacaacatgctgttcgggcttacagaaat
gctctgtttgtttacaaacaatatccttggagttacatcaatgatcatgtacattttaat
gtcgggaggtggtatggagtccttgggatatttgatgtagccatcaagcacttgctggag
gtcattgcctgtagccatcagtcgctgactatgcaaaacgtgttcctcaatgattttttc
cattttgttcagagtatggggaagaaatttggtgtacacaagcttcaacttcctgttttc
aacatgtcatcgctcagagttatatatgaagatcatcgcacttatgcatcagatgcagat
gttgacgttagcgaaagcatttggcaggagttggaggaagaaatgatcccatcatcatca
attgtcagaactaactggctggatgatcaacctaaatcttctgctttgagaaaatacaag
ggctcctgtgtttgtgtagctggagaagcagtaaaattgaacgttgagctcaagaatcct
ctacagatttctgttgctgtttctggcatttctcttatatgccaactttccaccactttg
gacgctctaagttctgaggtaagtgtgttgaccatggatgctgtggaagataaggctaat
acagagccctctgtttcaatatttgagactgacgaaaataatttcacagtgtcaaagctt
gacattgtactgggaggaggtgaaattaaaagagtgcaacttgatgttactccaaaagtt
gaaggtattctgaagctagttgggataaggtggacactttcagattcagtagtaggttat
caatactttgaatctgacacacgaaagaaaaacaagaaaggaaaaaaaggccctcgtcgt
tctttgaacaacagcctgattgtaatcaagggtttaccaaaacttacaggatatattgat
cacatgccaacgagagcatttgctggtgatttacagctcctcacactaaatctgagaaac
cattcagattatgctgtgaagggcataaaaatgaaaattagcaatccaagatttgtaatt
cctggtgattcatcagacatcaacctcaagtttccgcgctgcttaagaaaacatgcacag
tccgaaagcaatgatgtattgcctataattactaaggagaaattcaggggtttgctcttt
gcatttcctcaggatattgaaattcaaggaggagcaacactctcttggcctatttggttt
catgctgcaactccaggaaatgtttctctttatatatctctatattatgaaattgagggt
tccagtgacataacataccgtacactgcgcatgcattacaatcttgaggttgtgcaatcg
cttgaggtgtcatttgctataagtatgtgctcatcaaaattgcaagagtatatcgtgcgc
atggatgtcattaacaggactccatctgagtcatttgtacttcatcagttgtcatgtgtt
ggcagtaaatgggcagtttcagcgctgccttcatgcaattcgatcagctctgttgaaaca
gtattcgcaaatcaggctgtgtcgtgcttcttcgagataaaggattttgggacaggttca
tgtaaagaggcagaaagcagttcctacagatgtgatattgctttatgtcctgggagcagc
actgatgtgtttgacattgctcgatctcctctagctgattttcactatcaagaaagatgc
aggcaagggaaattacctaaggggccatgcagccttcttgattttgttctgatctcaaag
gcggtagctggtaactcttccaagtcagtacaagacttgcaactactttcccatcacaca
tgtcattgcagtgccctaagccggagccctatatggtggcttatggaaggacctcgaact
gttagtcatgatttctcaaagtcttactgtgaggtcaacatccagttggtgattcacaat
tctgcaggacataagatttgggtgagagtggttacttttgatggtatgccagagaaaagt
caaactgtacatccgcaggattcgaccagtgctctgggtggatggtatgatgtatcaccg
gaaaatgacataaaagcgatctctagtgccaagggtacacattttcaaaagcaatctacg
gagagcatttcaccgtatgtttggtgttcattgagttctgctcaaattgacctgcaacct
gacagttctgctagagttcctctaaaagtgtgcatatttgcacctggtacatacaatttt
tccaattatgagctacattggaaagtgcatccatctgagggagcacaaatggatgaaaat
gacagactgtcatctggtggtgatcaagggcatcccttctatgctacggttcttcaaagt
gcctag
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