Phragmites australis (common reed): 133915583
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Entry
133915583 CDS
T10575
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
paua Phragmites australis (common reed)
Pathway
paua03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133915583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
paua03051
]
133915583
Proteasome [BR:
paua03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133915583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_16
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
RuvB_N
AAA_28
NPHP3_N
TIP49
RNA_helicase
Mg_chelatase
Sigma54_activat
AAA_14
IstB_IS21
Parvo_NS1
TsaE
AAA_24
AAA_7
AAA_18
NACHT
AAA_30
DUF5906
AAA_25
NTPase_1
AAA_3
AAA_33
DUF3450
AAA_11
NB-ARC
ATPase
DUF6570
ABC_tran
AAA_17
ORC-CDC6-like
AAA_19
Motif
Other DBs
NCBI-GeneID:
133915583
NCBI-ProteinID:
XP_062214780
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All DBs
Position
4:8959856..8964675
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AA seq
420 aa
AA seq
DB search
MSAATTAPTPPATTPMAPPPSYPASSVASASAAAYAEDDDDLYGRLKSLQRHMEFVEIQE
EYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNGIVGSTTGSNYYVRILST
INRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPNVTYTDIGGCDIQKQEIR
EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG
FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEV
DLEDYVSRPDKISAADISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgctaccaccgctccgacccctccggcgaccaccccgatggcgcccccgccg
tcctacccggcctcctccgtggcctccgcttccgccgccgcgtacgccgaggacgacgac
gacctctacggccgcctcaagtcgcttcagcgccacatggagttcgtcgagatccaggag
gaatacgtcaaggacgagcaaaagaacctcaagcgcgagctgctacgcgcgcaggaggag
gtgaagcggatccagtccgtgccgctcgtcatcggccagttcatggagatggtcgacggc
aataacggcatcgtcggttccaccaccgggagcaactactacgtccggatcctcagcacc
atcaaccgcgagctgctcaagccctcggcgtccgtcgccctgcaccgtcactccaacgcg
ctcgtcgacgtgctgccgcccgaggcagactccagcatctccctgctcgggtcgtcagag
aagcccaacgtcacctatactgatattggaggatgtgacatccaaaagcaagaaattcgg
gaagctgttgagttgcccttgacgcaccatgagttgtacaagcaaattggtattgatcct
ccaagaggcgtgcttctgtatggtcctccaggtactggcaagaccatgcttgccaaagct
gtggcgcatcacactacagctgcttttatcagagtggttggttcggagttcgtacaaaag
tacttgggtgagggccctaggatggttcgagatgtattccgtttggctaaagagaatgcc
cctgctatcatattcattgatgaggttgatgctatagctacagcacgttttgatgctcag
actggtgctgacagggaagttcagcgtattcttatggagctactcaatcagatggatgga
tttgatcaaacagtgaatgtgaaggttataatggcaactaaccgagcagatacactagat
cctgctctgttgcgtcctggtagacttgacaggaaaattgagttccctcttcctgaccgg
cggcagaagaggcttgttttccaagtctgcactgccaaaatgaatttgagtgatgaggtc
gatttggaggattatgtttctagaccagataagatcagtgctgctgatatttctgctatc
tgtcaagaagctggcatgcatgctgtccgcaaaaacagatatgtcatcctccccaaggac
tttgagaagggttatcgaaccaacgtgaagaagcctgatacggactttgacttctacaaa
taa
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