Phragmites australis (common reed): 133915609
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Entry
133915609 CDS
T10575
Name
(RefSeq) protein CASP-like isoform X1
KO
K09313
homeobox protein cut-like
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133915609
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
133915609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
Rep_fac_C
JmjC
Motif
Other DBs
NCBI-GeneID:
133915609
NCBI-ProteinID:
XP_062214809
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Position
4:complement(9514435..9525897)
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AA seq
707 aa
AA seq
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MEPSPAQAAASDRDRSPPPPPPAPPPQSSAAAAISSPLAVVCSFWKDFDLEKERSGLDEQ
GLKIAENQETSQKNRRKLAESTRDFKKASPDEKLTLFNSLLKSYQEEVDNLTKRAKFGEN
AFLNIYQKLYEAPDPYPVLASMADQDQKLSELETDNRKMKLELEEYRAEAAHLKNQQATI
RRLEERNRQLEQQMEEKVREMVEMKQRSMAEDSQKTLEALKDREWSLQDQLRQATESVKN
MQKLHESAQSQLFELRTQSEEDRAAKEAEVNLLLDEVERAQARLVSLEREKFSFFPQGDL
RSQLQTTNEDASQSSDYLESSDILESSLNAKEKIITDLNAELRNIESTLSSEREMHVNEL
KKLTALLTEKESALMELKKELQERPTQKLVDDLKKKVQILQAVGYNSIEAEDWELATNGE
EMSKLEALLLDKNRKTEHELTQLKVKISEKSILLEEAEKRITILTSKVEEQQKLILKLED
DILKGYSSTDRRGSLLNDWDLQDIGSSEAPEGTDSRHASPDQYQSSMLKVICSQRDRFRA
RLRETEEELRRLKEKYEMLTVELEKTKADNVQLYGKIRYVQDYSHDKIVSRVPKKYAEDI
ESGSSDVESKYKKMYEDDINPFAAFSKKEKDQRYKELGFRDKITLSSGRFLLGNKYARTF
IFFYSIGLHLLVFTLLYRMSALSYLNTTPGHYENILDAGNQTLSHML
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagccctcgccggcgcaggcggccgcgtcggaccgcgaccgctcgccgccgccgccc
ccaccggctcccccgccccagtcgtcggccgcagcggcaatctcgtcgccgctcgctgtc
gtctgcagcttctggaaagactttgatttggagaaggaaagaagtggcttggatgagcag
ggtttaaagattgcagagaatcaagagaccagccagaagaatagacgcaagcttgctgag
agcactcgggatttcaaaaaggcatctccagatgagaagctgactttattcaactctttg
ctgaagagttatcaagaggaagtcgataacctcacaaagagagcaaagtttggagaaaat
gcatttctcaacatttatcagaagctctatgaagcccctgatccctatccagttcttgct
tctatggctgatcaagaccagaaactatctgaattggagactgacaatcgcaaaatgaaa
ttagaactcgaagaataccgtgctgaagctgcgcacttgaagaaccagcaggcaacaatc
aggcgacttgaggagcgaaaccgccaattagaacagcagatggaggagaaagtgagggag
atggttgaaatgaagcagcgaagcatggcagaagatagtcagaaaactcttgaagccctc
aaagatagggaatggtcattgcaggaccaactaaggcaagctacagaaagtgtaaagaat
atgcagaagctacatgaatcggcacaaagccaattgtttgagcttcgcactcaatcagag
gaggatcgagctgcaaaggaggctgaagtcaaccttctgttggatgaagttgaacgggct
caagcccgattagttagtcttgaaagggaaaagttttcttttttcccacagggggatcta
cgttctcagttgcagacaacaaatgaagatgcaagccagagtagtgattatttggaatca
agtgatatacttgagagttccttgaatgccaaggagaagattatcacagacttgaatgca
gaacttcgcaatatcgaaagtactttatcaagtgagcgagaaatgcatgtgaacgagctg
aagaagttgaccgctttactcactgaaaaggaaagtgctcttatggagttgaagaaagaa
cttcaagaaagacctacacaaaaactagtagatgatctcaagaaaaaggttcagattttg
caggctgttggttacaactctattgaagctgaagactgggagctagctaccaatggtgaa
gaaatgagcaagttggaagcattgcttcttgacaagaaccgtaaaacggagcatgaacta
acacaactgaaggttaaaatatcagagaagtcaattcttcttgaggaagctgaaaaaagg
atcactatactaacttcaaaggttgaagagcaacaaaagttgattttgaaacttgaggat
gacatactaaagggctatagttcaactgataggaggggctcacttttgaatgattgggat
cttcaagacatcggttcaagtgaagcaccagagggcactgattcaaggcatgcatcacca
gatcaatatcaaagttctatgctcaaggtcatttgcagtcagagggatcgtttccgtgca
cgattacgtgaaactgaggaggaactgaggagattaaaagagaagtatgagatgctaact
gttgaactggaaaaaactaaagcagataatgttcaactgtatggaaagattagatacgtc
caggactacagccacgacaagattgtttccagagtaccaaagaagtatgcagaagatatt
gaaagtggttcttcagatgttgaatcaaagtacaagaaaatgtatgaggatgacataaat
ccttttgctgcattctcaaagaaggaaaaggatcaacgatacaaggaacttggttttaga
gataaaatcactcttagtagcggccgttttctccttggtaacaaatacgcccggacattt
atattcttctacagtattggattgcatctacttgtatttacattgctgtacagaatgtca
gctttgagctatctcaacacaacacctggacactatgaaaacattctggacgctggcaat
cagacgctatcgcacatgctctaa
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