Phragmites australis (common reed): 133915655
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Entry
133915655 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133915655
KO
K12817
pre-mRNA-splicing factor 18
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133915655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133915655
Spliceosome [BR:
paua03041
]
Complex C
Other components
Step II factors
133915655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Phage_int_SAM_4
Motif
Other DBs
NCBI-GeneID:
133915655
NCBI-ProteinID:
XP_062214876
LinkDB
All DBs
Position
4:10382806..10385570
Genome browser
AA seq
375 aa
AA seq
DB search
MDVLKRELQRKRQLLDADFGGRKVLRRAEIEAREVQRIREAECQLLLHKRLRGAHSHPAS
SPSGSSSNSSPTSAAAADASRGENGQSGPAETLPREEVIRRLRVLRQPATLFGEDDDARL
RRLHEVLEDPASLADVDAAEIREGQTNDFLRDIQALRTKAAAKPKAGAEAQRREGNGEPR
AVPFEELCDEDKIVAFFGRLMGEWSQEVDEVPEAERRTAKGKAAVATCKQCARYLEPLFK
QCKKKALPPDVRQALLEVVKCCMRRDYLAAVDNYIKLAIGNSPWPIGVTMVGIHERSARE
KICTNSVAHIMNDETTRKYLQSVKRLITFCQRKYPTDPSRSVEFNSLANGSDLQSLLAEQ
NAKNSEETLRLVAAL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgctgaagcgcgagctgcagcgcaagcgccagctcctggacgccgacttcggc
ggtcgcaaagtcctccgccgcgccgagatcgaggcccgcgaggtccagcgcatccgcgag
gccgagtgccagctcctcctccacaagcggctccggggcgcccactcccaccccgcctcc
tcgccttctggttcctcctcgaactcctcgcccacctccgccgccgccgccgacgcgtcg
cggggggagaacggtcagagtggcccagcggagacgctcccaagggaggaggtcatccgg
cgcctgcgggtgctgcgccaaccggccacgctcttcggtgaggacgacgacgcgcgcctc
cgccgcctccacgaggtcctcgaggaccccgcctcgctcgccgacgtcgacgcggcggag
atccgggaggggcagaccaacgacttcctccgcgacatccaggcgctgcggaccaaggcg
gccgcgaagcccaaagccggcgcggaggcccagcggagggagggcaacggcgaaccgagg
gcggtgccgttcgaggagctctgcgacgaggataaaatcgtcgcgtttttcgggaggctg
atgggcgagtggagccaggaggtggacgaggtgccggaggcggagcggcggacggccaag
gggaaggccgcggtggccacctgcaagcagtgcgcgcgctacctcgagccgctcttcaag
cagtgcaagaagaaggctctccctcctgatgtccgacaagcattgctggaggtggtcaag
tgctgcatgagacgagactacttggctgcagtggacaactatatcaagctagcgatcggc
aactcaccgtggccaattggtgtgacaatggttggtatccatgagcgatcggcccgggaa
aagatctgcacgaacagcgtggctcacatcatgaatgatgagacaaccaggaagtacttg
cagtctgtgaagaggctcataacattctgccagaggaagtaccccaccgatccatcaaga
tcagttgagttcaacagcctggccaacggcagtgatctgcagtctctcctggcagagcag
aacgcgaagaattcagaagaaacgcttcggttagtcgctgcgttgtga
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